Aristolochia californica: 137955741
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Entry
137955741 CDS
T10486
Name
(GenBank) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
acak Aristolochia californica
Pathway
acak04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137955741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137955741
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137955741
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
137955741
NCBI-ProteinID:
XP_068658941
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MVTPSPGSTSLMATSFPDEVLEHIFSFVDLDRDRNAISLVCKAWYRIERCCRHRIFVGNC
YAVSPEIVIQRFPEVRSVALKGKPHFADFNLVPYNWGGNVYPWIKEMATAYPWLEELRLK
RMVVTDDSLELLSRAFKNFKVLVLVSCEGFSTNGLAAIASNCRNLRELDLQENDVEDRSG
QWLNCFPESFTSLVSLNIACLAGEVSFSALERLVARCPNLKTLGLNHDIPLDKLANLLQR
APQLVDLGTGSFSAEPRPQLYSKLASAFEGCKELKSLSGFWSVTPTYLPALYPLCAGLIS
LNMSYATVQCLELTKLITKCRNLQRLLVLDYIEDAGLEAVAECCKDLQELRVFPSDPFGT
EQHVSLTERGLVAISGGCPKLNSVLYFCHQMSNAALLTVARNSPNLTRFRLCIIEPRTPD
YITQEPLDTGFGAIVKFSKDLRRLSLSGLLTDRVFEYIGAHAKKLEMLSVAFAGDSDLAL
HHILSGCKSLRKLEIRDCPFGDKALLANATKFETMRSLWMSSCSVSLRACKLLAEKMPKL
NVEVIDERGLPESRPDNCHVEKLYVYRSITGPRSDMPEFVRTM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcctagtcctggttcgacctctttaatggcgacatccttccccgacgaagtc
cttgagcacatcttctcgtttgtcgacttggaccgagaccgaaacgccatctcgctcgtc
tgcaaggcatggtaccgcatcgagcgatgttgccgccaccggatcttcgtcgggaactgc
tacgccgtcagccccgagatcgtgatccaacggttcccggaggtccgatccgtggcgctt
aaggggaagccgcattttgcggactttaacctcgttccctacaactggggagggaacgtg
tatccatggatcaaggagatggcgacggcgtacccctggctcgaggagctgagactgaag
agaatggtggtcaccgatgatagcttggagctgctgtcgcgggcttttaagaattttaaa
gttttggtgctggtgtcttgcgagggttttagcactaatggacttgctgctattgcctcg
aattgcaggaatctgagggaactggatttacaggagaatgatgtggaggatcggagtgga
cagtggctcaattgtttccctgagtcatttacttctctagtttcactaaatattgcatgc
cttgctggggaagtgagcttttcagcccttgagcgtcttgttgcgaggtgtcctaaccta
aagacccttgggctcaatcatgacattcctcttgataagctggctaacctccttcaacgg
gctccacaactggttgatctcggcactggatccttttctgctgaacctcggccacaactc
tattctaagttagcaagtgcctttgagggttgcaaggagctgaagagcctttctgggttc
tggtcagtaactccaacatatcttcccgccttatacccactctgtgcaggtttaatatcc
ttgaacatgagttatgctactgtccagtgtcttgaactcaccaagctcattaccaagtgc
cggaacttgcagcggttattggtcttagactacattgaggatgctggtctcgaggctgtg
gctgaatgctgtaaagatctccaagagctgcgtgtatttccatctgacccttttgggaca
gaacagcatgtatccttgacagaacgagggctagttgccatttctggcggttgccctaag
ctcaactctgtcctttatttctgccaccagatgtccaatgctgctcttcttactgttgct
cgaaattctcctaacctcaccagattccgcctatgcattattgagccacgaacacctgat
tacatcactcaagaaccacttgacaccggctttggtgccattgtgaagttcagtaaagat
ctccggcgcctgtcactctctgggctgctgacagatcgtgtttttgagtacattggagct
catgctaagaaacttgagatgctttctgtggcttttgctggggacagcgacttggctctc
catcatatattgtctggctgcaagagtctccgcaagttggagattagggattgcccattt
ggtgataaggcccttttggccaatgctaccaaattcgagacaatgcgatccctttggatg
tcttcttgctctgtgagcttacgagcttgtaaattattggcagagaagatgcccaagctc
aacgtagaggttattgatgagagaggactgccagagtcacggccagacaattgtcatgtt
gaaaagctctacgtttacagaagtattactgggccaaggtctgatatgccagaatttgtt
cggaccatgtaa
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