Aristolochia californica: 137955991
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Entry
137955991 CDS
T10486
Name
(GenBank) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
acak Aristolochia californica
Pathway
acak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137955991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acak02000
]
137955991
Transporters [BR:
acak02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137955991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
MukB
nSTAND3
Motif
Other DBs
NCBI-GeneID:
137955991
NCBI-ProteinID:
XP_068659361
LinkDB
All DBs
Position
Unknown
AA seq
1890 aa
AA seq
DB search
MGILRRQLKAMLRKNWLLKIRHPFSTAAEIFLPTVVMLLLIGVRTRVDTQLHPTQPYIKK
GLFVDVGKSDISPSFDKILQNLVAMGEHIAFAPDTEETRRMLDILSFRFPLLKVAGIVYK
DELELETYIRSDLYGFTDHAKNISYPRVKGAIIFHEQGPLSFDYSIRLNHSWAFSGFPDV
KTIMDTSGPYLNDLELGVSPVPTLQYGLSGFLTLQQMVDSFIIFAAQQNITETDYAHVNS
SVVPRFNASSLLQLPWTTFSPSNIRMAPFPTRAYTDDEFQSIIKTVMGVLYLLGFLYPIS
RLISFTVFEKEQKIKEGLHMMGLRDETFYLSWLITYSVQFAISSAIITVCSMGSLFMYSD
KSVVFIYFFSFGLSAIMLSFLISTFFSRAKTAVAVGTLSFLGAFFPYYTVNDPAVPMVSK
VLASLLSPTAFALGTVNFADYERAHVGLRWSNIWQASSGVNFLVCLLMMYLDTIIYCGFG
LYLDKVLPRENGVHYPWNFLFTKSFWGKKNNLEVKLSDKVSESATTLGCKDCPEPAIEAI
SLDMKQQELDGRCIQIQNLQKVYVTKKGKCCAVNSLQLTLYENQILALLGHNGAGKSTTI
AMLVGLIPPTAGDVLVCGKNIRTDMDDIRKGLGVCPQHDILFPELTVKEHLEIFAILKGV
EEDMLESKVNEMIDEVGLVDKVNTVVGALSGGMKRKLSLGIALIGNSKVIILDEPTSGMD
PYSMRSTWQLIKKIKKGRIILLTTHSMDEADVLGDRIAIMANGSLRCCGSSLFLKHRYGV
GYTLTLVKTSPGASITADIVQRHVPSATCLSEVGTEISFRLPLSSSSAFESMFREIESCI
WKSGCNSEASCNSDKTAYGIESYGISVTMLEEVFLRVAGSEFNETESLEQSKPHAESSMV
TYKASDLPSKASNSKLCFRNCWNVFLILSSAVWRASCLILSTIFSFIAFLNIHCCGCGVF
LGSTFCEHFRALIIKRAIYARRDRRTVVFQLLIPAAFLFFGLLFLELKPHPDQLSVTLTT
SHFNPLLGGGGGGGPIPFNLSLPISEKVASYVKGGWVQKAELRSYSFPDAENALADAIDA
AGPTLGPLLISMSEYLVTSLNESYQSRYGAVVMDDLNDDGSIGYTVLHNSSCQHGGPTYI
NLINAAILRLATNNEAMMIQTQNHPLPMTKTQHAQHHDLDAFSAAIIVSIAFSFIPASFA
VSIVKEREVKAKHQQLISGVSILSYWLSTYAWDFISFLFPTSFAIILLHIFGLEQFIGSG
CLLPTVMIFLEYGLAVAASTYCLTFFFSDHSVAQNVILLVHFFTGLVLMVISFIMGLIPA
TKSVNSVLKNIFRLSPGFCFADGLASLALRKQGMKLGSGYRTLDWDVTGASISYLAVESL
LYFVFTIGLELMPAHCLRPISIRGRWPSFKPSYGDIPKETLEPLLNQPTVDIGFDVDEDI
DVRAERHRVLSGSTDNALLYLHNLRKVYPGGQNRPSKVAVQSLTFSVQEGECFGFLGTNG
AGKTTTLSMLSGEETPSNGTAYIFGNDICVHPKAARLHIGYCPQFDTLLELLTVQEHLEL
YARIKGVPEMRLRDVVEEKLMEFDLWKHAHKPSYSLSGGNKRKLSVAIAMIGNPSIVILD
EPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMGEAQALCTRIGIMVGGKLRCIGS
PQHLKSRFGNHLELEMKPTEVSSSELDNLCGIIHETLFDFPSHPRSILGDLEICIVGSDS
VASENVAEVSLSQDMITAIGRWLGNEERTRKLICSTPATDGLFEEQLSEQLIRDGGIPLK
IFSEWWLAKEKFSVIDSFINSSFPGATFQGCNGLGVKYQLPFGEGSSLADVFGHLERNRW
NLGIAEYSISQSTLETIFNHFAAANASPNR
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgggaattctccggcgacaactcaaagccatgctccgcaagaattggctcctcaaaatt
cgccatcctttttccactgccgccgagatttttcttccgaccgtggttatgcttttgctc
atcggagtgaggacgagagtcgatacgcaactgcacccgacgcagccttatattaagaag
ggactctttgtcgacgttggcaaaagcgacatttctccgagttttgacaaaattctgcaa
aacttggttgctatgggcgagcatatagctttcgcgcccgatacggaggagactaggcgg
atgctcgatattttaagcttccggttccctctgcttaaggtagctgggattgtttacaaa
gatgagttggagctagaaacttacatacgttcagatctttatggttttactgaccatgcc
aagaatatatcttaccctcgagtcaaaggagcaattatatttcatgaacaaggtcccctt
tcatttgactatagcatacgcctcaatcactcatgggccttctcagggtttcctgatgtc
aaaaccatcatggacacaagtggtccttatctgaatgacttggaactgggtgtttctcct
gtacccactctacaatatggcttgagtggatttctaactttgcagcagatggtggattct
ttcataatatttgctgcacaacaaaacataactgagactgactatgcacatgtgaattca
tctgtcgtccccagatttaatgcttcctctctcctccagcttccatggaccacttttagt
ccatctaacatacggatggctccatttcccacacgtgcatacactgacgatgagttccag
tccatcataaagactgtgatgggagttctgtatctcttgggctttctttatccaatttct
cgtctaatcagttttaccgtctttgagaaggaacagaagattaaggaaggtcttcacatg
atgggtcttagagatgagacattttatctttcgtggttaattacatacagtgtacagttt
gctatctcttctgctatcatcacagtctgctcgatgggtagtcttttcatgtatagtgat
aaatcggtggtgtttatatacttcttttcatttggcctcagtgcaatcatgctctccttt
ttgatctctacgttcttttcacgggccaaaacggctgtggcagttggtacactgtctttt
cttggagccttcttcccttattacactgtcaatgatcctgcagttcccatggtatcaaag
gtcttggcttctttgctctctcctacagcctttgcccttggtacagtaaattttgctgat
tacgagcgtgctcatgttggtcttcgctggagcaatatttggcaggcttcttcaggtgta
aattttttggtatgcctcttgatgatgtatctcgacacaataatctattgtggctttggg
ctctacctggacaaggttttgcccagagaaaatggagtgcattatccatggaacttttta
tttactaagagcttttgggggaagaaaaacaatctagaagtcaaacttagtgacaaggtg
tctgaaagtgctacaactcttggatgtaaagactgtccagaacctgctattgaagcaatt
agcttagatatgaaacaacaagaacttgatggccgatgtatccagattcagaatttacaa
aaagtctatgtgacaaaaaaaggaaaatgttgtgctgtgaactctttacaactcactttg
tatgagaaccagatccttgcacttctaggacataatggagctggtaagagcacgacaatc
gcaatgcttgttgggcttattccacctacagctggggatgttcttgtatgtggcaagaat
attagaacagacatggatgacatacggaagggactgggtgtgtgcccacaacatgatatt
ctcttcccagaattaactgtcaaagaacatctagaaatctttgccatcttgaaaggcgtt
gaggaagacatgttggaaagcaaagtaaatgaaatgattgatgaagttggtttggtagac
aaagttaatacagttgttggggctttatctggtgggatgaagcggaaactctcccttgga
atagctcttataggaaacagcaaggttatcattctggatgaacctacaagtggaatggat
ccatattccatgcgctcgacttggcaattaataaagaagataaagaagggtagaatcatc
ttgctgacaacacactccatggatgaggctgatgtgcttggtgatcgcatagctatcatg
gcaaatggttcattgagatgctgtggaagctctctttttctcaagcatcggtatggggtt
ggttataccctcactcttgtgaagacctcaccaggtgcttctataactgctgatattgtt
caacgtcatgttccatctgcaacctgcttaagtgaggtgggtacggagatttcatttagg
cttcctctctcctcatcatctgcatttgaaagcatgttccgggaaatagagagctgcatc
tggaaatctggttgtaactcagaagcaagctgtaacagcgacaaaaccgcctatggtatt
gagagttatggaatctctgtaaccatgttagaggaagtgttcttgagagtggcaggatct
gagtttaatgaaactgaaagccttgagcagagtaagccacatgcagagtctagtatggta
acatataaagcctctgatctcccatcaaaagcctcgaattccaaattgtgctttagaaat
tgttggaatgtgttcctcattttaagttccgctgtgtggagagcatcctgtttgatcctg
tcaaccatttttagtttcattgcattcttaaacattcactgctgtggctgtggagtcttc
cttggatccacattttgtgaacactttcgagctctgatcataaagagagcaatctatgct
cggcgagacagaagaacggttgtcttccagcttctcattccagctgccttcttgtttttc
ggtctgctttttcttgaactaaagccacatcctgatcaactatcagtgactctcacaaca
tcacattttaatcccttgctaggaggcggtggtggaggagggcctattcccttcaatctg
tctttgcctatctcagaaaaggtggcatcctatgttaaaggcgggtgggttcagaaagca
gaacttaggtcttacagctttcctgatgcagagaatgcacttgcagatgctattgatgca
gcaggaccaacattgggccccttacttatttctatgagcgaatatctagttactagtttg
aatgaatcttaccagtcaaggtatggtgcagttgtaatggatgatctcaatgatgatgga
agcataggttatactgtacttcacaacagttcttgtcagcatggaggtccaacttatatt
aatctgataaatgctgcaattttgaggctggctactaataatgaagctatgatgatccaa
actcaaaatcatcccttgccgatgacaaaaactcaacatgcacagcaccatgatctggat
gctttctctgctgcaattattgttagcattgcattttctttcatccctgcttcatttgca
gtgtctattgtgaaggagcgtgaagtcaaagcaaagcatcaacagctaattagtggagtg
tctatactttcatattggttatccacatacgcatgggactttatcagcttcttattcccc
acatcatttgcaatcattctacttcacatctttggtcttgaacaatttattggaagtggt
tgtctcttgcccactgtaatgatatttttggagtatggattagccgttgcagcatcaaca
tactgcctcacttttttcttttcagatcactctgttgcacagaacgttatactcttggtg
cacttttttactggacttgttcttatggttatctccttcatcatgggccttataccagca
actaaaagtgtaaactctgttctgaagaacatttttagattgtctcctgggttttgcttt
gcggatggacttgcttcactggctcttcggaagcaaggtatgaaactgggatctggatat
cggacgcttgactgggatgtaactggtgcatcaatctcttatttagcagttgagagtctt
ctttacttcgttttcactattggtcttgagcttatgccagcacactgcctaaggccaatt
tcaattagagggaggtggccaagttttaaaccttcctatggtgatattcccaaggagaca
ttggagcctcttctgaatcaacctacagtagatattggttttgatgttgatgaagatatt
gatgtgagggcagaacgacatagggtactttcgggttccactgataatgccttattgtac
ctgcataatctccggaaggtatatccaggaggacagaatcgcccttcaaaagttgctgtg
cagtctttaactttctcagttcaagaaggagaatgttttggctttttaggaactaatgga
gctgggaagaccactactttgtccatgttatctggagaagaaacaccatcgaatggaact
gcatatatatttgggaatgatatatgtgtgcaccccaaggctgctcggctgcatatcgga
tattgcccccaatttgataccctactagaacttctgacagttcaggagcatcttgagctt
tatgcaagaataaaaggggttccagaaatgaggcttagggatgttgttgaggaaaagcta
atggaatttgacttatggaagcatgctcataaaccatcatattctcttagtggcggaaac
aaaaggaaattatctgttgcaattgctatgattggcaatccttccattgttattctcgat
gagccatctacaggaatggatccaattgccaagcgatttatgtgggaagtaatttcccgt
ctatctacgagacaggggaaaactgcagttattctgactactcatagtatgggtgaagct
caagctctttgtacacgaattggaataatggtcggaggtaaactcagatgcattggaagc
cctcagcatctgaaatctcgctttggaaaccatttagaacttgagatgaagcctacagaa
gtgagctccagtgaattggacaatctatgtggaataattcacgaaaccctctttgacttt
ccttctcatccaaggagtatacttggtgaccttgaaatttgcatagttggaagtgattct
gttgcatctgagaatgtggcagaggtcagtttgtctcaagatatgataactgcaattggt
agatggcttggcaatgaggagcgaacgaggaaacttatttgttcaacaccagctactgat
gggttgtttgaggaacaattatcagagcaactaattcgtgatggtggcattcccttgaaa
atattctctgagtggtggttggccaaggagaagttctcggtcattgactcttttatcaac
tcatcattccctggtgcgaccttccaagggtgcaatggcttgggtgttaaatatcagctg
ccgtttggagaaggctcctcactagctgatgtcttcgggcacttggagagaaacaggtgg
aatctaggaattgcagagtatagcatcagtcagtctacactggagaccatttttaaccat
tttgctgctgcaaatgcaagccctaatcgatga
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integrated database retrieval system
