Aristolochia californica: 137956017
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Entry
137956017 CDS
T10486
Name
(GenBank) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137956017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137956017
03036 Chromosome and associated proteins [BR:
acak03036
]
137956017
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137956017
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137956017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
137956017
NCBI-ProteinID:
XP_068659404
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGTSSVFGASNASNNPFTPKPFGSTTPFGSQTGGSIFGGTSTGVF
GATQSSSPLGSTPAFGASSTPTFGSSAFGASSTPAFGNSSSSFGGSSVFGQKPAFGGFGS
TAGQTSPFGSTFQQSQPAFGSSLFGSSTPFGAASTPTFGASSTPAFGASSTPAFGVNTAP
AFGSTSTPTFGSTGSMFGSSSTPVFASSATPAFGASSTPVFGSSSATAFGSSSTPAFGAS
STPAFGASSTPSFSFGSAPTFAQSSSTFGSTSFGMMSSPFGAQNSPFGAQPTTTTFGSPG
FGQSAFGSQRGGSRVAPYTPTAEVDGGSGTQPAGKLESISAMPVYKDKSHEELRWEDYQL
GDKGGPNPASQPASGIGFSAPAQSSPFGTTSTFGQTSANPFSSASSTNPFASKTPTFGST
SFGSSSTPSFSSPFGTSSTSPFGTTISSTTPSLFGATTTPAFGASSSPSLFGGSSMPAFG
ASSSPSIFGSASAPGSSPAFGSGLTFGNTQSSGLFQSNTPSLGQTASGFGSSVPAFGQTT
SSTFGQPNPFGTPATGFGGNLFSSSSSPSPLSTSTPIGFGPTTVQPSLQTSFSAPIQTSG
AFSFGNFGQTQSVASSGFGGVSNVFGQGAFGQSATTQSTLVAQPAPVSNPFGTLPAMPQM
SIGRAGSSPSIQYGISSMPVADKPAPVRVSSLLTSRHLSQRRTRLPPRKYHPKIDGPKIS
FFSDEEEAPSTPKADALFIPRENPRALVIRPMEQWPSRASAEKPVFKDVSTPVHENGKSS
GDASASAVNGSFGHDHHDKNVAENGFDGQHNTSPARPKQKANGVLYEDHGQKGDSYITLS
GHRAGEAAIVYEHGADIEALMPKLRHADYYTEPRIQELAAKERAEPGYCRHVKDFVVGRH
GYGNIKFFGETDVRRLDLEALVQFNNKEVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFN
KKTGQQYTDGPKVEKYKEMLRKKAEDQGAEFVSYDPVKGEWKFRVNHFSHYELGDDLGSF
PAGAADVNVKL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcaactaatccttttgggcagtcttcaagtagcccatttgggacttcatca
gtttttggagcaagtaatgcatccaataatccttttactcctaaaccatttgggagtact
actccttttggttcacaaacgggtggttccatatttggtggtacatcaactggtgtattt
ggagcaacgcaatcttcttcacctctaggttctactcctgcatttggtgcttcttccacg
ccaacttttgggagctctgcttttggtgcttcatccacaccagcatttggaaatagctca
tcatcatttggaggatcttctgtatttgggcagaaacctgcttttggagggtttggctcg
accgctggtcaaacaagtccatttggtagtacatttcagcaatcacaacctgcatttggt
agtagcttgtttggttccagtactccttttggtgcagcaagtactccaacttttggtgca
tcaagtacccctgcctttggtgcatctagtactccagcttttggtgtgaacacggctcct
gcttttggctctacgtcaactccaacatttggtagcacaggctctatgtttgggtcatca
agcacgccagtgtttgcttcctcagctacccctgcttttggtgcatctagtactcctgtg
tttggatcttctagtgccactgcctttggctcatcgagtactcctgcatttggagcttct
tctacaccagcttttggtgcttcaagcaccccatcttttagctttggctctgcacctaca
tttgcccaatcaagttccacatttgggagcacttcatttggcatgatgtcttctcccttt
ggtgcccagaattctccttttggagcccagccaacaacaaccacttttggcagtcctggt
tttggccagtctgcctttgggagtcagcgtggtggaagcagagttgcaccctatacaccg
acagctgaggtggatggcggcagtggaacacagccagctggcaaactggagtctatatca
gctatgcctgtttacaaagacaagagtcatgaagaattacgatgggaagactatcaacta
ggagacaaaggtggaccaaatcctgccagtcagcctgcaagtggaattggttttagtgca
cctgcacagtcaagcccgtttggcacaacaagcacgtttggtcaaacaagtgcaaacccc
ttctccagcgcttcttcaaccaacccctttgcttcaaagactccaacgtttggttctact
agctttggttcatcttcaacaccgtcattcagctctccctttggtacttcctccacaagc
cccttcgggactacaatctcatccaccactccctccctgttcggggccacaactacccct
gcatttggagcaagttcatctccatccttatttggtgggtcaagcatgcctgcatttggt
gccagttcatccccttcgatctttggttctgcatcagcacctggatcaagtccagctttt
gggtctggcttgacctttggaaacacccagtcttcgggactttttcagtcaaacactcct
tctcttggacagacagcatctggctttgggtcgagtgttcctgcttttggacaaactact
agttctacatttggtcagcctaatccctttgggacacctgcaactggatttgggggaaat
ttgttttcaagcagctcttcgccctccccgctttctacaagtactccaattggttttggc
ccaacaacggtgcaaccttctctgcaaacttcattctctgcacccattcagacatctggt
gcgttttctttcggcaactttggtcagacacaatccgttgcttcaagtggctttgggggt
gtttcaaatgtcttcggtcagggagcctttggacaatctgctactactcagagtactttg
gttgcacaaccagcaccagtctcaaacccttttggaacgttgcctgccatgccacaaatg
tcaattggccgtgctggctcttccccttctattcagtatggaatttctagcatgcctgtt
gcagacaagccggcccctgttagagtttcctctttgttgacttcgagacatttgtctcag
aggagaaccaggctacctcctaggaaataccacccgaagattgatggtccaaagatatct
ttcttcagcgatgaagaagaagctccaagcacgcctaaggctgatgctcttttcatcccc
agggaaaaccctcgtgctcttgtaattcgtcccatggagcagtggccttctagagcttct
gcagaaaaacctgtgtttaaagatgtgtctactcctgttcacgaaaatggtaaatcttcc
ggggatgcatctgcctctgctgtaaatggttcctttggtcatgatcatcatgataaaaat
gtggctgagaatggctttgatgggcagcataatacttccccggccagacccaaacagaag
gcaaatggagttctctatgaagaccatggacagaaaggagattcatacattacattgtca
ggtcaccgtgctggggaagcagctatagtctatgagcatggggctgacattgaagctcta
atgccaaagctacggcatgctgactactacactgagcctcggatccaagagctggctgcc
aaggagcgggcagagcctgggtactgccgccatgtgaaggattttgtggtgggtaggcat
gggtacggaaacataaaattctttggggagacagatgttcggaggcttgatttagaggcc
cttgtgcaattcaacaacaaagaagttatagtgtacatggatgaaagcaagaagcctcca
gtgggccagggcctcaacaagcctgcagaggtcacccttctcaacatcaaatgctttaat
aagaaaactggccaacaatacacagacggcccaaaggtggaaaagtacaaggaaatgctg
aggaagaaagctgaggaccagggtgctgagtttgtttcttatgaccctgtgaaaggggag
tggaaatttagagtgaaccacttcagccactatgaactcggggatgatctaggttcattc
cctgccggtgctgccgatgtcaatgtgaaattatga
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