Aristolochia californica: 137956478
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Entry
137956478 CDS
T10486
Name
(GenBank) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137956478
Transcription machinery [BR:
acak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137956478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
Motif
Other DBs
NCBI-GeneID:
137956478
NCBI-ProteinID:
XP_068660103
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MGVVTVSSSASKSPFGIGTRFSTYRSPLKRRIFLAFKTDKGRNSALVAPQEYVPLPIEAP
NDHQKGLRRTTKTAKRVRAISSDGASSCTLDLDYNAAAAKLENIYKLSPAEVSDVEEFTQ
LRQKTRKKSHGQKEKGKTESHVVVRNHRKKLGRLNLKNRIALKMKKDEEKAVSGQSKQKK
GEVTCREVDRLVRDYSLSTDLVSVDWKKIPAVLSSREHAWLFSLMQPMKALVHVKESLLK
DLGREPTDGELAEATNMNVKEARKRIEVGQAARNKLIKHNLRLVLFVINKYYQEIASGQK
FQDLCQAGVKGLITAIDRFEPKRGLRLSTYALFWIRHSIMRSMTLTSFTRVPFGLESVRL
EIQRAKTELSFELGRPPTDDEIIAKTGISQERYYDVMKASKSILSLNAKHSTTQEEFLKG
IADIDGVSGDNRRQSALLRLAIDDVLDSLKPEESLVVRQRYGLDGKGDRTLGEIAGNLNV
SREMVRKYEVKAFMKLKHPARVDYLRKYLV
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgttactgtttcaagttcagcttctaagtctccatttggcattggaacaaga
ttttcaacataccgttccccactcaaaagacgcatattcttagctttcaaaactgacaaa
ggcaggaattcagcattagtagcacctcaggagtatgtacctctaccaatagaagcaccc
aatgatcatcagaagggcttgaggagaactaccaagactgctaaaagagtccgagccatt
tccagtgatggagcttcttcgtgtacactagacttagattacaacgcagctgcagctaag
cttgaaaacatttataaacttagcccagcagaggtctctgatgttgaagaattcactcag
ctacgacaaaagacaagaaagaaaagccatggccagaaagaaaagggaaagacagaaagc
catgttgtcgtaaggaaccacagaaagaagctggggcgtttgaatctcaagaacaggata
gctttgaaaatgaagaaagatgaagagaaggctgtgagtgggcagtccaagcagaagaag
ggggaagtgacttgcagagaagttgatagacttgtcagggattattctctttcaaccgat
ttggttagtgtggattggaagaagataccagctgttctttcatctcgtgaacatgcttgg
ctgttctcgctgatgcagcctatgaaggcactcgttcatgtcaaggaaagtttgctaaaa
gacttaggaagggaacccacagatggtgaactagcggaggcaacaaatatgaatgtaaaa
gaagctagaaagcgtattgaggtcggccaagctgcgaggaacaaactaattaagcacaat
cttcgactagttttgtttgtaatcaataaatactatcaagagattgcaagtggtcagaag
ttccaagacctttgtcaagcaggagtcaaaggtctgatcacagcaattgatcggttcgaa
ccaaaacgagggcttcgactatccacctatgctcttttttggatacgacattctataatg
cgctcaatgactctcacaagctttacacgagttccctttggtcttgaatcagttagattg
gagattcaaagggctaaaactgaattgtcctttgagcttggaagaccacctacagatgat
gagataattgccaaaacaggaatttcccaagaaagatattatgatgtaatgaaggcttca
aagtcaattctttctctcaatgcaaaacactcaaccactcaagaagaattcctaaaaggg
attgcagatattgatggtgtttcaggcgacaatagaaggcaatctgcccttctcaggcta
gctattgatgatgtgctggactcattgaagcctgaggagagcttagtggtcaggcagaga
tatggactagatgggaaaggagacagaacactaggggaaatagctggaaatttgaatgtg
tccagagagatggtcagaaagtatgaagtgaaagcattcatgaaactcaagcatcccgct
cgagtggattaccttcgtaaatatctggtttga
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