Aristolochia californica: 137958496
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Entry
137958496 CDS
T10486
Name
(GenBank) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137958496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137958496
03036 Chromosome and associated proteins [BR:
acak03036
]
137958496
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137958496
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137958496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
137958496
NCBI-ProteinID:
XP_068661647
LinkDB
All DBs
Position
Unknown
AA seq
1476 aa
AA seq
DB search
MFDSTNPFGQSSTSPFGTSSVFGGSNASNNPLTPKPFGTFGSQTGGSISDGTSTGVFGAA
QSSSPLGSTPAFGASSMPTFGSSAFGASSTSSFGGSSILGQKPAIGGFGSTTGQTSPFGS
TLQQSQPAFGSCVFGSRTPFGAASTPIFVASSTPAFGASSTAAFAAASTPTSVASSTPFC
TAAFAAASTPTSVAFSTPAFGTAASTPTSVSSSTPAFDAASTAAFAAASTPTSVASSTLA
FGSAAFAAAKTPTSAKAAKTLTSVSSSTPAFGAFAAATTPTSVASSTPAFGTTDFAAVSI
PISVASGTPACCIAVFAAASTPISISSSTPAFGASSTAAFAAASTPTSVASSTAAFASAS
TPTYVASCTPTFGVNTAPTFGSTSTPTFGNTGSVFGSSSTPVFGSSVTPALGASSTPVFG
SSSVSTFGSSSTPALGASSTPPFGASSTPSFNFGSSPTFGQSSSAFGTTPHGAQSSPFGA
QSTTTPTFGYPGFGQFGFGSQRGGSRVAPYAPTAEVDDWTGTLDSTSAMPVYKDKSHEEL
RWEDYQLGDKGGPNTAGQPASGIGFSAPAQSNLFGTTGTFAQTSANPFSSTTSTNPFASK
TPTFGSTGFGSSLSPSFSSPFGTSASPFGTTTSSTTPSLFGATTTPAFGASSSPSLFGGS
STPAFGASSSPSIFGSASAPGSSPAFGSGLTFGNTQASGVFQSSTKSTIKQVQTQSTTTT
FGNPGFGQSGFGSQRGGSRVAPYAPTAEVDGGCGTQPAGKLESTSAMPVYKDKSHEELRW
EDYQLGDNGGPNPASQPASGIGFSAPAQSNLFGTTSTFAQTSANPFSSTTSSPSPSFISP
FGTSASPFGTTISSTTPSLFGATTTPAFGASSSPSLFGGSSTHAFSASSSSAFGSGLTFG
NTQASGLFQSSSPLGQTASPAFGSGLTFGNTQASGLFQSSTKSTIKQVQTQSPTTTFGNP
GFGQSGFGSQRGGSRVAPYASTAEVDGGCGTQPAGKLESTSAMPVYKDKSHEELRWEDYQ
LGDNGGPNPASQPASGIGFSAPAQSNLFGTTSTFAQTSANPFSSTTSFPSPSFISPFGTS
ASPFGTTTSSTTPSLFGATTTPAFGASSSPSLFGGSSTPAFGASSSPSIFGSASARGSSP
AFGSGLTFGNTQASGLFQSSSPLGQTASPAFGSGLTFGNTQASELFQSSTPLGQTASGFG
STAPAFGQTTSSTFGQPNPFGTPSTGFWGNLFSSSSTPSLLATSTSIGFGQTMPFLSSPF
SAPIQTSGAFSFGNFGQTLSAPSSGFGGVSNNFGQGAFGQSGTIQSYWVPQPVPVSNPFG
TLPAMPQMSIGRAGSSPSIQYGISSMPAVLEIHGIQVVIVHVADKPAPVRVSSLLTTRHL
SQRRTRLPPRKYHPKTDGPKVRLGKPRAPVIRPIEPWASRASAEKSVLKDVPTPIRENGK
SSGDASVSAVSGSFGDDGHDNCRRPVTESVTRSTWN
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactcaactaatccttttgggcagtcttcaactagtccatttgggacttcgtca
gtttttgggggaagcaatgcttctaataatccattgactcctaaaccttttgggactttt
ggttcacaaacgggtggatccatatctgatggtacatcgactggtgtatttggagcagca
caatcttcttcacctctaggttcgacacctgcatttggtgcttcttccatgccaactttt
gggagctctgcttttggtgcttcatccacatcgtcctttggaggatcttctatattaggg
cagaaacctgctattggagggtttggctcaaccactggtcaaacaagtccatttggtagc
acacttcagcaatcacaacctgcatttggtagttgtgtgtttggttccagaactcctttt
ggtgctgcaagtacaccaatttttgttgcatccagtacccctgccttcggtgcatccagt
actgcagcttttgccgctgcaagtacaccaacttctgttgcttccagtacccccttctgt
actgcagcttttgctgctgcaagtacaccaacttctgttgcattcagtacccctgccttc
ggtactgcagcaagtacaccaacttctgtttcatccagtacccctgccttcgatgcagcc
agtactgcagcttttgctgctgcaagtacaccaacttctgttgcatccagtacccttgcc
ttcggtagtgcagcttttgctgctgcaaaaacaccaacttctgcaaaagctgcaaaaaca
ctaacttctgtttcatccagtacccctgccttcggtgcatttgctgctgcaactacacca
acttctgttgcatccagtacccctgcctttggtactacagattttgctgctgtaagtata
ccaatttctgttgcatccggtacccctgcctgctgtattgcagtttttgctgctgcaagt
acaccaatttctatttcatccagtacccctgccttcggtgcatccagtactgcagctttt
gctgctgcaagtacaccaacttctgttgcatccagtactgcagcttttgcttctgcaagt
acaccaacttatgttgcatcctgtaccccaacttttggtgtgaacacggctcctactttt
gggtctacgtcaaccccaacatttggcaacacaggctctgtgtttggctcatcaagcaca
ccagtgtttggttcctcagttacccctgcacttggcgcatctagtactcctgtttttgga
tcttctagtgtctctacctttggctcatcgagtactcctgcacttggagcttcatctact
ccaccttttggagcttcaagcaccccatcttttaactttggctcttcacctacttttggc
caatcgagttctgcatttggcacgactccccacggtgcacagagttccccttttggagcc
caatcaacaacaacaccaacttttggctatcctggttttggccagtttggatttgggagt
cagcgtggaggaagcagagttgcaccgtatgcaccaacagctgaggtggatgactggact
ggaacactagattctacatcagctatgcctgtttacaaagataagagtcatgaagaatta
cgatgggaagattatcaactgggagacaaaggtggaccaaatactgccggtcagcctgca
agtggcattggttttagtgcaccagcacagtcaaacctgtttggcacaacaggcacattt
gctcaaacaagtgcaaaccccttctccagcactacttcaaccaacccctttgcttcaaaa
acaccaacatttggttctactggttttggttcatctctgtcaccatcattcagctctccc
tttggtacctcagcaagcccctttgggactaccacctcatccactactccctccttgttt
ggggccacaactacccctgcatttggagcgagttcctctccatccttatttggtggatca
agcacgcctgcatttggtgccagttcatccccttcaatctttggttctgcatccgcacct
ggatcaagtccggcttttgggtctggcttgacctttggaaacacccaggcctctggagtt
tttcagtcaagcactaaatcaacaatcaaacaagtgcaaacccaatctacaacaacaact
tttggcaatcctggttttggccagtctggatttgggagtcagcgtggtggaagcagagtt
gcaccatatgcaccgacagctgaggtggatggtgggtgtggaacccagccagctggcaaa
ctagagtctacatcagctatgcctgtttacaaagataagagtcatgaagaattacgatgg
gaagattatcaactgggagacaatggtggaccaaatccggccagtcagcctgcaagtggc
attggttttagtgcaccagcacagtcaaacctgtttggcacaacaagcacatttgctcaa
acaagtgcaaaccccttctccagcactacttcatctccatcaccgtcattcatctcaccc
tttggtacctcagcaagcccctttgggactaccatctcatccactactccctccttgttt
ggggccacaactacccctgcatttggagcgagttcctctccatccttatttggtggatca
agcacgcatgcatttagtgccagttcaagttcggcttttgggtctggcttgacctttgga
aacacccaggcctctggactttttcagtcgagcagtcctcttggacagacagcatctccg
gcttttgggtctggcttgacctttggaaacacccaggcctctggactttttcagtcaagc
actaaatcaacaatcaaacaagtgcaaacccaatctccaacaacaacttttggcaatcct
ggttttggccagtctggatttgggagtcagcgtggtggaagcagagttgcaccgtatgca
tcgacagctgaggtggatggagggtgtggaacccagccagctggcaaactagagtctaca
tcagctatgcctgtttacaaagataagagtcatgaagaattacgatgggaagattatcaa
ctgggagacaatggtggaccaaatccggccagtcagcctgcaagtggcattggttttagt
gcaccagcacagtcaaacctgtttggcacaacaagcacatttgctcaaacaagtgcaaac
cccttctccagcactacttcatttccgtcaccgtcattcatctcaccctttggtacctca
gcaagcccctttgggactaccacctcatccactactccctctttgtttggggcaacaact
acccctgcatttggagcgagttcctctccatccttatttggtggatcaagcacgcctgca
tttggtgccagttcatccccttcaatctttggttctgcatcagcacgtggatcaagtcca
gcttttgggtctggcttgacctttggaaacacccaggcctctggactttttcagtcaagc
agtcctcttggacagacagcatctccagcttttgggtctggcttgacctttggaaacacc
caggcctctgaactttttcagtcaagcactcctcttggacagacagcatctggctttggg
tcaaccgctcctgcttttggacaaactactagttctacctttggtcagcctaatcctttt
ggaacaccttcaactggattttggggaaatttgttttcaagcagctcaacgccctccctg
cttgctactagcacttcaattggttttggccaaacaatgccttttctttcatctccattt
tctgcacccattcagacatccggtgctttttcttttggaaactttggtcagacactatcc
gctccttcaagtggttttggaggtgtttcaaataactttggtcagggagcctttgggcaa
tctggtactattcagagttattgggttccacaaccagtcccagtttcaaacccttttgga
acattgcctgccatgccacaaatgtcaattggtcgtgctgggtcttccccttctattcag
tatggaatttctagcatgcctgctgtacttgaaatccatgggattcaagttgtgattgtg
catgttgcggacaagccagcccctgttagagtttcgtctttgttgactacaagacacttg
tctcagaggcgtaccaggctacctcctaggaaataccatccaaagactgatggtccaaaa
gtgagattaggaaaaccgcgggctcctgtaattcgtcccattgaaccatgggcatctaga
gcttctgcagaaaaatctgtattgaaagatgtgcctactcctattcgtgaaaatggcaaa
tcttcgggggatgcatctgtttctgctgtaagtggttcctttggtgatgatggtcatgat
aattgcaggagacctgtaactgaatcagtgacacgaagtacttggaattga
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integrated database retrieval system
