KEGG   Aristolochia californica: 137958511
Entry
137958511         CDS       T10486                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
acak  Aristolochia californica
Pathway
acak03082  ATP-dependent chromatin remodeling
acak03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137958511
   03083 Polycomb repressive complex
    137958511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:acak03036]
    137958511
Enzymes [BR:acak01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     137958511
Chromosome and associated proteins [BR:acak03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     137958511
   HDAC complexes
    Sin3A-HDAC complex
     137958511
    BRAF-HDAC complex
     137958511
    REST complex
     137958511
    SHIP complex
     137958511
    MiDAC complex
     137958511
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     137958511
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137958511
  Chromatin remodeling factors
   NuRD complex
    137958511
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 137958511
NCBI-ProteinID: XP_068661667
LinkDB
Position
Unknown
AA seq 431 aa
MPSKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQNLFTNELAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNQLCDIAINWAGGLHHAKKCAASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKETGEREGKYYAINVPLKDGIDDASFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELSNEIPDNEYIKYFGPEFSLKIKNGNIENLNSKSYLGTIK
MQVFESLRCIQHAPGVQMQEVPPDFYIPDFDEDETNPDERIDQHTQDKQIQRDDEYYDGD
NDNDHNMDDAL
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgccttccaaggacagaatcgcctatttctatgacggagacgtgggaaatgtctacttt
ggtccaaaccatccaatgaaaccacatcgtctttgtatgacgcaccatcttgtcctttca
tacgatcttcacaagaagatggagatatatcggccacacaaagcatatcctgtggaactg
gcacagtttcattctgctgattatgtagagttcttgcaccgaattactcctgatactcag
aatttatttacaaatgaattagccaaatataatcttggcgaagattgtcctgtgtttgaa
aacttgtttgagttttgtcagatttatgctggtgggacattagatgcagcacggagattg
aacaatcagctttgtgacattgccatcaattgggctggtgggctgcatcatgcaaaaaag
tgtgcagcatcggggttttgttatataaatgacttagtacttggaattttagagctttta
aagtatcatgctcgagttctttacattgacatagatgtgcatcatggggatggagttgaa
gaagccttctacttcacggaccgggtgatgaccgtgagtttccacaagtatggagatatg
ttttttcctgggacaggtgatgttaaggaaacaggagaaagagaaggaaaatattatgcc
ataaatgtccccctcaaggatgggatagatgatgccagttttactcgacttttcaaaact
ataattgcaaaggttgttgaaacatatcttccaggtgtcattgttctccaatgtggggct
gattcccttgctggggaccgcttgggctgcttcaatctctccattgatggacatgcggaa
tgtgtaagatttgtgaagaaatttaatttgcctctattggtaactggaggtggtggttac
accaaagaaaatgttgctcgttgctggactgttgaaactggagttcttttggacacagaa
ctttcaaatgaaataccagataatgagtatataaaatactttggccctgaattctccttg
aagattaagaatggaaatattgagaacttgaatagcaagtcatatcttggcacaatcaag
atgcaagtgtttgaaagtttaagatgcatccaacatgctcccggcgtacagatgcaagag
gttcctcctgatttttacatcccagactttgacgaagatgagactaatcctgatgaacgt
attgaccagcatactcaagacaagcagatccaacgggatgatgaatattatgatggggac
aatgacaacgatcataacatggacgatgccctgtaa

DBGET integrated database retrieval system