Aristolochia californica: 137958855
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Entry
137958855 CDS
T10486
Name
(GenBank) phytochrome B-like
KO
K12121
phytochrome B
Organism
acak Aristolochia californica
Pathway
acak04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
137958855
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SSDB
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Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_4
HATPase_c
HisKA
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
137958855
NCBI-ProteinID:
XP_068662138
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MASGSRTSQTNKSHSSGSSNIRAQPHQHHHSHQHHPQSDSISRAIAQYTTDARLHTEFEQ
SGEPGKSFNYSESVKSTNISSVPEQQITAYLSKIQRGGHIQPFGCMIAIKESTFQVIAYS
ENSIEMLDLTPQSVPTLDTPPLLTIGTDVRTLFTPPSAILLEKAAGAREITLLNPIWIHS
RNSGKPFYAILHRIDVGIVLDLEPARTEDPALSIAGAVQSQKLAVQVISRLQALPGGDIK
LLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAESKRADLEPYIGWHYPATDIPQASRF
LFKQNRGRMICDCHAMPVSVVQDESLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLALA
VIINGYEEAVPTSGGRNPTKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQL
ASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGNYYPQGVSPT
EAQIKDVAKWLLTFHGDSTGLSTDSLADAGYPGATSLGDEVCGMAVAYITSRDFLFWFRS
HTAKEIKWGGAKHHPEDKDDGQRMNPRSSFKAFLEVVKSRSLPWETAEMDAIHSLQLILR
DSFKDAEVSNSKAMVNNNNLTDMEFQGVDELSSVAREMVRLIETATAPIFAVDSDGRVNG
WNAKIAELTGLSVEEAMGKSLVHDLVYKESSDVVDKLLSRALRGDEDKDVEIKLKTFGTA
GTTKAVFVVVNACSSKDYTNNIVGVCFVGQDITGQKVVMDKFIHIQGDYRAIVQSPNPVI
PPIFASDENTCCLEWNTAMEKLTGWSRNEIVGKILVGDVFGSCCRLRGRDELTKFMILLH
KAISGQDSDQFPFTFFDRNGKCIQALLTANKRVNMDGQIIGAFCFLQVASPELQQALEIQ
RQQEKKCFARMKELAYICQEIRNPLNGIRFTNSLLEATNLTDDQKQLLETSTACEKQMMK
ILKDVGLESIEDGSLKLEKADFLLGRVINAVVSQVMILLRQRGLQLIRDIPEEIKVMAVY
GDQVRLQQVLAGFLLNMVKYAPTPGGWVEIHVRPSLKQISEGIDIVFLEIRLICSGDGLP
PELIQDMFHSSQWVTQEGLGLSMSRKLLKLMNGEVQYIRDSERSYFLLLMELPTLQTVSD
DMN
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcagcagaacctcccaaactaacaagagccactcctccggttcaagcaac
atccgcgcccaacctcaccaacatcaccattcccaccagcaccacccgcagtcggactct
atcagcagagctattgctcagtacaccaccgacgctcgtctccatactgaattcgagcag
tcaggggaaccgggtaagtccttcaactactcggagtctgtcaaaagtactaatatctcc
tccgtccccgaacagcaaatcaccgcttacctctccaaaattcagcgtggaggccacatc
cagccttttggttgcatgattgccattaaagagtccaccttccaagttattgcgtacagc
gaaaactccattgaaatgctcgaccttactccgcagtccgtccccaccctcgatactcca
ccactgcttaccattggtactgatgtccggacactgtttacccccccaagtgcaatcctc
ttagaaaaggcggcaggagcgcgagaaatcacacttctgaacccaatttggatccactca
aggaactccggaaaaccattttatgcaattctgcaccgtattgatgtggggattgtttta
gacttggagcccgcgagaaccgaggaccctgccttgtccattgctggggccgtccagtct
cagaaactcgctgtgcaggtcatatcacgtctccaggctttgccaggtggggatattaaa
ctcttgtgtgacactgtggtggaacatgtccgtgagctcacaggctatgatcgcgtcatg
gtttataaattccacgaggatgaacacggggaggtggtagcagagagcaaaagagcagat
ttagaaccctatataggttggcactatcctgccaccgatattccacaggcttcgaggttc
ttgttcaaacagaaccgggggagaatgatttgtgattgccatgccatgccggtgagtgta
gttcaagacgaatcattgatgcaacctctgtgtctggtgggttcaacactgcgagcaccc
catggatgtcatgcgcagtacatggcaaacatgggatctattgcttcattggcactggcg
gttattatcaatgggtatgaggaggctgtccctactagtggtgggaggaatccgacgaaa
ctatggggcctagttgtgtgccaccatacatcccctcgctgcatcccctttccgctccgc
tatgcttgtgagttcctcatgcaggcatttggacttcaactaaatatggaactacaatta
gcatcccagctgttagaaaaacatgttctcaggacgcagactctactgtgtgacatgctc
ttgcgtgactccccaacaggcattgtaacacagagtccaagtatcatggaccttgtcaaa
tgtgatggtgctgctttgtactaccagggtaattattacccacagggagtgagccccact
gaagcacagatcaaggatgttgcaaaatggttattgacttttcatggggattccactgga
ttgagcacagatagcttggctgatgccggctatcctggggctacttcccttggtgatgaa
gtttgtggaatggctgtggcgtatatcacctcaagagatttccttttttggttccgatcc
catacagcaaaggagatcaagtggggtggtgctaagcatcatccagaggataaagatgat
ggccagagaatgaacccacgttcatcatttaaggcatttttggaggtggtcaagagccga
agtttgccttgggagaccgcggagatggatgccatacactctctgcaactgattttgcgg
gactctttcaaagatgctgaagtgagtaattcaaaggccatggtgaacaacaataatctc
acagatatggagtttcagggagtggatgaactaagttcagtggcgagggagatggttagg
ttaattgagactgcaacagctccaatctttgctgttgattctgatggaagagttaatggg
tggaatgcaaaaattgctgaattaactgggttgtcagttgaagaagctatgggaaaatca
ctagttcatgaccttgtttacaaggaatcctcagatgttgtggataaactactttctcgt
gctttaagaggtgatgaagataaggatgtggagataaagctgaagacatttgggactgca
ggaacaactaaggctgtttttgtggtggttaatgcatgctctagtaaggattacacaaac
aacattgtcggtgtgtgctttgttggtcaggatataacagggcaaaaagtggtcatggat
aagttcattcatatacaaggtgattatagggctatagtacaaagtcctaatcctgtgatt
cctcctatatttgcttcagatgagaatacttgttgcttagagtggaacacagccatggaa
aagcttactggctggtcaagaaatgaaattgttgggaagatcttagttggagatgttttt
ggtagttgttgtcggctgcgggggcgggatgaactaacaaaatttatgatccttcttcac
aaagcaatcagtgggcaggattctgatcaattcccatttacattttttgaccgaaatgga
aaatgcatccaagccctcttgactgcaaataaaagagttaatatggatggtcaaattatt
ggggccttctgtttcttgcaggtagcaagccctgaactacagcaagcattagaaatacag
agacagcaagagaagaagtgttttgcgagaatgaaggagttggcttatatttgtcaagag
atcagaaatcctcttaatgggatccgatttactaactcactattggaggccacaaattta
actgatgatcagaaacaacttcttgagactagtactgcttgtgagaaacagatgatgaag
attttaaaggatgttggtttggagagtattgaagatggttctttgaaacttgagaaggca
gactttctgctcggacgtgtcataaatgctgttgttagtcaagtaatgattctattgagg
cagagaggcttacaattaatccgtgacattccagaagaaataaaagttatggctgtttat
ggggatcaagtcagactccagcaagtgctagctggtttcttgttgaacatggtgaagtat
gcaccgacaccaggaggttgggtagaaatccatgttagaccaagtttaaaacagatctct
gaagggatcgatattgtatttctggaaatcaggctgatatgctctggggatggcctccct
ccagaactcatccaagacatgtttcacagtagtcaatgggtcacacaagaagggctaggt
ctgagcatgtccaggaagctcctgaagttgatgaatggagaagttcaatatattagagac
tctgagaggtcttacttccttctcctaatggaacttcccactttgcaaacagtctcagat
gacatgaactag
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