KEGG   Aristolochia californica: 137958869
Entry
137958869         CDS       T10486                                 
Name
(GenBank) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
acak  Aristolochia californica
Pathway
acak03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137958869
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acak03021]
    137958869
Enzymes [BR:acak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137958869
Transcription machinery [BR:acak03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     137958869
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 Dpp_8_9_N Zn_ribbon_10
Other DBs
NCBI-GeneID: 137958869
NCBI-ProteinID: XP_068662156
LinkDB
Position
Unknown
AA seq 1808 aa
MEGSFLPSFIREGRAISLQFNVSTLDEILKSSVSGFPISHPGQLGNSFLGLPLESGNRCE
SCGTSEHGLCEGHFGYIELPVPIYDPRHIGELRRILSIICLKCLRVKGKVSDNPENKKMS
YNRCTSCQDCRALSIKEAKSKNGATYLEMKLPSASYLKSNRWQFLVRYGYDYGGEALHRS
LLPSEALEILKNIPEETKRRLASKGYHPQNGFIMECLPVPPNCLSAPDVSNGVAIMSSDP
SKSLLKKILTVIGTIRRSRSGSPKFESNEIEANALQYVVMQYLQLRGTSKATDDFRRKFL
LGKEEDGSGSKAWLEKMKTLFIRKGSGFSSRSVISGDAYKGVDEIGIPLEIARKVTFEER
VTAHNILRMQELMEKGLCVTYRDGTTSYTVNEGYRKRTTLKIGQIVNRAIMDGDVVFINR
PPTTHKHSLQAFSVYVHNDHTVKINPLICAPLSADFDGDCVHLFYPQSLAAKAEVLELFS
VEKQLLSSHTGNLNLQLVHDSLLSLKLLFKTFFLSKPTAQQLAMFVSSILPEPALPKSSQ
HGPLWTVLQVLQSALPADLDCFAERYLIRQSEMLRLDYNRDSLQSSFREVVTSVLMEKGP
KEAVKFFNLVQPLLMEILFSKGYSVGLRDFFVSKDVLADLKMKVQHFTHQMQHMRSRNDE
FVELQVENDLNNMKLPIVTFLLKLSAMGNLIDSKSRSAICKIVEQLGFLGLQLYTRGKFY
SKGLVDDMYLYYKSRFNGSDCPSEAFGLVKSAFFEGLNPFEELTHSISSRETLIRSSRGL
TEPGTLFKNLMAVLRDVVMCYDGTVRNICSNSVVQFEYRVGPMCNMDSVAPAGEPVGILA
ATAVSNPAYKAVLDSSQSNNSSWALMKEVLLCKINFNKEYVNDRRVVLFLNDCNCGKKYC
KENSAYILLNLLERITLKDFATEFTIQYQKQQNSEGAETNFSLVGHIHFDKVKLMKLNIG
LDEICQKCDKVIEYYRKKRSSISHLLKETRLFASECCTLKKHCVGEWSQVPCLQFYQNGI
ASSRDDNFKETSEVMGDVICPVLLKTILKGDSRLSQTNIIWTHPNSMGWVRKEGKSLKGE
VALEILVEKDAVKQHGDAWRVVLDSCLPLMHLIDVNRSIPYGMKQIQELLGISCAFEQAV
QRLEMSINSVDKGVLKEHLKLVASSMTCTGNLIGFNPGGCRALFRSSKVQVPMMEATLFA
PMKSFERSAEKCYSDSLSGTVASCAWGKTVSIGTGTQFEFIWNGKEMKANEDVKLDAYEF
LHLVTTSFREKEASTKCIGLEVDELDGDEDLASSPEQHMDFDEPHFDEGNASKKSNSGWE
ESKQSAWSSWSATDTGPNASCSDPVDNSDAWKCWKSKDADMWDKEAQKNSAALADESNSK
SGWKSRNEGFKKGPCDAVDTSDAWECWKSKDADRWDEEVQKKTDGLPNESDSRSGWKPRN
DKFKRGPCDAVDASDAWQYWKSKDADKWDKEAHKKPASLPDGSVSRSGWKSGNEGLQSGP
READCNTSLSYSKSGAVWESNDSMNVWDRRRPQVHNDPSTPKSNSWEDWRPNSIPTDNAW
ESLRFNAGSGLDGLEDSRRNDTQKVSPDESNAWNANSIQTPNDQSSPLDDWASKEIHAKR
SPAADSWTGSRRHGWSKGVTKSHSLDASVAGVSKNEKSHSTKVSDHYSAQASRNTSGIFT
ATRRRKDQFTTEEVEILNDVDPVITTIKNVLHKSSNCERLSDDDQKYILENVFSYHPDKS
AKMGNNFEYITVDEAQGHQGSRCFYLVSSDGAREDFSYHKCIKNYVQVKYPEMSESFSKK
YFKKPGIH
NT seq 5427 nt   +upstreamnt  +downstreamnt
atggaggggagctttttgccttcatttatcagagaaggaagagctattagtcttcaattt
aatgtatcaactcttgatgaaatacttaaatcatctgttagtggctttccgattagccac
cctggacagcttggaaattcttttctgggtttacccttagagtcaggcaatcgatgtgaa
tcctgtgggacctccgagcatggtctatgtgaaggccactttggatacattgaattgcct
gtacccatctatgatcctcgccacattggtgaattgaggcgcattttaagtattatctgc
ctgaagtgtctgagggtaaagggcaaggtttctgacaacccggaaaataaaaagatgtca
tataatcgctgcacatcttgtcaggattgtcgagctttgtcgataaaggaagcaaaatct
aaaaatggtgccacatacttagaaatgaaactgccatctgcgtcctatttgaagagtaac
cgctggcagtttttagttagatatgggtatgactatggtggtgaagctcttcatcgttct
ttgcttccatctgaggctctggaaattctgaagaacattcctgaggaaacaaagagacga
ctagcttcaaagggttatcaccctcaaaatggatttattatggagtgtttacctgtgcct
ccaaattgtttgtctgcgcctgatgtatctaatggagttgctattatgtcttctgatccc
tctaagtctctgctaaaaaaaattcttactgtgattgggaccattaggagatcaagatct
ggttctccaaaatttgagtccaatgagattgaggcaaatgcgttgcaatatgtagttatg
caatatttgcagctcagaggtactagtaaggctactgatgacttccggaggaagttcttg
ttgggcaaagaggaggatggtagtggctccaaagcatggctggagaaaatgaaaactctg
tttattcgaaagggatcgggattctcatctcgatctgtaattagtggtgatgcatacaag
ggtgtagatgaaattggtattcccctagagattgcccggaaagtcacatttgaggaaaga
gtaactgctcacaacattttgagaatgcaagaactgatggagaaaggtttatgtgtgaca
tacagggatgggacgacaagttatacagtcaatgaaggatataggaagcgtacaacattg
aaaattggacagatagtgaacagggcaattatggatggtgatgtggttttcatcaatcga
ccccctacaacccacaaacactctttacaagcattttctgtatatgttcacaatgatcat
acagtcaaaatcaaccctcttatttgtgctccactatctgctgattttgatggagactgt
gttcacctgttctatccgcagtcccttgcggctaaggcagaggttcttgagctgttcagt
gtggagaaacaacttcttagttcccatactgggaatcttaacctccaattggtgcatgac
tcacttttatcactcaaacttctcttcaagacatttttcttgagcaagccaacagcacaa
cagttagcaatgtttgtttcttccattttaccagagcctgctttgcctaagtcttctcaa
catgggcctctgtggactgttctccaggtgctgcagagtgctttgccagctgatcttgat
tgctttgcagagagatacctaatcaggcagagtgagatgctgagacttgactataacaga
gattcacttcagtcatctttcagggaagtggttacctctgttttgatggagaagggcccc
aaagaagctgtcaaatttttcaatcttgtacagccattgttaatggaaattttgttctct
aaagggtatagtgttggtctgagagatttttttgtttcgaaagatgtcttagcagatctc
aagatgaaggttcagcattttactcatcagatgcagcatatgagatcaaggaatgatgaa
tttgtggagttgcaagtggagaatgatctgaacaacatgaaactaccaattgtgaccttt
cttctgaaactatctgctatgggaaacttgattgattcaaaaagtcgttctgctatctgt
aaaattgttgagcagcttggatttttggggcttcaactctacacgaggggtaaattttat
tctaagggcctggttgatgacatgtatttgtattacaaaagcaggtttaatggatctgat
tgtccctctgaggcatttgggttagtgaagagtgctttctttgaaggtctgaatcccttt
gaagagttgacccattcaatctcatcaagggaaactctcatccgttcatctcgaggtctg
actgagccaggaacattgttcaaaaatttgatggcagtcctcagggatgttgttatgtgc
tacgatggaacagttaggaacatatgcagcaattctgtggttcaattcgagtatagggtg
ggacctatgtgtaatatggatagtgtagctccggctggtgaacctgttggcatactagct
gccactgcagtgtcaaaccctgcctacaaggctgttcttgattcctctcagagtaacaat
tcatcatgggcactgatgaaggaagtactcctttgcaaaattaatttcaataaggagtat
gtcaatgatcggcgggtggttttgttcttgaatgactgcaactgtggcaaaaagtattgc
aaggagaattcagcatatatactcctaaatctgttggaaagaatcactttaaaggatttt
gctactgagttcactatccaatatcagaagcaacaaaactcagaaggtgcagagacaaac
tttagtcttgtgggtcatattcatttcgacaaggtgaagttgatgaaactaaatattgga
ttagatgaaatctgtcagaaatgtgacaaggttatagagtactacaggaagaaaagaagc
agtatatcacatttgctgaaggaaactagactttttgccagtgaatgctgcactctcaag
aagcattgtgttggagagtggtctcaggtgccatgtctacagttctaccaaaatggaatt
gccagttcacgtgatgataatttcaaggaaacttcagaggttatgggtgatgttatctgt
ccggttctgttgaagactattttaaaaggtgactctcgattgagccaaacgaacataata
tggacccatccaaattcaatgggttgggtgaggaaggaaggcaagtcactgaagggtgaa
gttgcattagaaatattggtggagaaggatgcagtgaagcaacacggtgatgcttggagg
gttgtgttagattcttgtctgccactgatgcacctcattgatgtgaatagatctatccct
tatggcatgaaacagattcaagaacttcttggaatttcatgtgcttttgagcaagctgtt
cagcgacttgaaatgtctataaattctgttgacaaaggtgtgcttaaggagcatctgaag
ctcgtagcaagtagtatgacctgcactggaaatctcatcggcttcaatcctggtggttgt
agggcactttttcgctcttcaaaagttcaagtgccaatgatggaggccacactatttgca
cctatgaaatctttcgagagatcagcagagaaatgctattcagattctttatctgggaca
gttgcttcttgtgcctggggtaaaactgtgtctattggaacaggaacacagtttgaattt
atatggaatggaaaagagatgaaagctaatgaagatgttaagttagatgcatatgagttt
ctgcatctggtaacaacctcttttagagaaaaagaggctagtactaaatgtattggtctg
gaagttgatgaacttgatggagacgaagacctggcttcgtctcctgagcagcacatggat
tttgatgaaccacattttgatgagggtaatgctagtaaaaaaagcaattcgggctgggaa
gaatcaaagcagagtgcatggtcaagttggagtgctactgatacgggaccaaatgcaagt
tgcagcgatcctgtggataactctgatgcttggaaatgctggaaatctaaggatgcagat
atgtgggataaagaagcccaaaagaattccgctgctttggctgatgaatctaacagtaag
tcagggtggaaatcaaggaatgaaggattcaaaaaaggaccttgtgatgctgttgatacc
tctgatgcttgggaatgctggaaatctaaggatgcagataggtgggatgaagaagtccaa
aagaagactgatggtctgcctaatgaatctgacagtaggtcagggtggaaaccaaggaat
gataaattcaaaaggggtccttgtgatgctgttgatgcctctgatgcttggcaatactgg
aaatctaaggatgcagataagtgggataaagaagcccataagaagcctgctagtttacct
gatggatctgtgagtaggtcaggatggaaatctgggaatgaaggactccaaagtggtcct
cgtgaagctgattgtaacacttctctgagttactcaaaatctggcgctgtctgggagtca
aatgattcaatgaatgtgtgggaccgaagaagaccacaagtacataatgatcctagcaca
ccaaagtccaactcatgggaagattggagaccaaattcaattcctactgataatgcttgg
gaaagtttaagattcaatgcaggatctgggcttgatggtttggaagactcgagaagaaat
gacactcaaaaggtatccccagatgaatcaaatgcttggaatgctaactcaattcaaact
cccaatgatcaatctagtccacttgatgattgggcttcaaaggaaatacacgctaagaga
tctccagctgcagatagttggactggtagtaggaggcatggctggtcaaaaggagttaca
aaatctcattctttggatgcttcagttgccggtgtttcaaaaaatgagaagagtcattca
actaaggtatctgatcattacagtgctcaagccagtcgcaacacaagtggaatttttact
gcaacaagaagacgcaaggatcaattcacaaccgaagaagttgaaatactaaatgatgta
gatccggtcatcacaacaataaagaacgttctccacaagtccagtaattgtgagcggctt
tctgatgatgatcaaaaatatatcttagagaatgtattcagttatcatcctgacaaatca
gctaaaatgggcaacaattttgaatatatcacggttgatgaagcgcagggtcatcaaggg
agcagatgcttttatcttgtctcgtctgatggggccagagaagatttctcatatcacaaa
tgcatcaagaactatgtacaggtcaaatatccggaaatgtctgaatcatttagcaagaag
tacttcaaaaaaccaggtattcactag

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