Aristolochia californica: 137959284
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Entry
137959284 CDS
T10486
Name
(GenBank) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
acak Aristolochia californica
Pathway
acak04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137959284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137959284
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137959284
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Ortholog
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
F-box
LRR_4
Motif
Other DBs
NCBI-GeneID:
137959284
NCBI-ProteinID:
XP_068662782
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MVTRSACASSLMATSFPDEVLEHVFSFVDSDRDRNAISLVCKSWYRIERCCRRRIFVGNC
YAVSPQIVIRRFPEVRSVALKGKPHFADFNLVPYNWGGNVYPWIKEMEAAYPWLEELRLK
RMVVTDDSLELLSQAFKNFKVLVLVSCEGFSTDGLAAIASNCRNLRELDLQENDVEDRSG
QWLNCFPESFTSLVSLNIACLAGEVSFSALERLVARSPNLKTLGLNHDIPLDKLANLLRR
APQLVDIGTGSFSAEPRPQLFFKLASAFEGSKELKSLSGFWSVTPTYLPALYPICAGLTS
LNMSYATVQCPELTKLITKCRNLQRLLVLDYIEDAGLEAVAACCKDLQELRVFPSDPFGT
EQHVSLTERGLVAISDGCPKLNSVLYFCHQMSNAALHTVARNSPNLTRFRLCIIEPRTPD
YLTQEPLDTGFGAIVKFSKDLRRLSLSGLLTDRVFEYIGAHAKKLEMLSVAFAGDSDLAL
HHILSGCKSLRKLEIRDCPFGDKALLANAAKFETMRSLWMSSCSVSLQACKLLAEKMPRL
NVEVIDERGQPESRPDNCHVEKLYVYRSIAGPRSDMPEFVRTM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcgtagtgcttgtgcgagctctttaatggcgacatccttccccgacgaagtc
ctcgagcacgttttctcgtttgtcgactcggaccgagaccgaaacgccatatccctcgtc
tgcaagtcatggtaccgaatcgagcggtgttgtcgccgccggatctttgtggggaactgc
tacgccgtcagtccccagatcgtgatccggcggttcccggaggtccgatccgtggcgctt
aaggggaagccgcattttgcggacttcaacctcgttccctacaactggggagggaacgtt
tatccctggatcaaggagatggaggcggcgtacccatggcttgaggagctgaggctgaag
agaatggtggttaccgatgatagcttggagctgctgtcgcaggcgtttaagaattttaaa
gttttggttctggtctcttgcgagggcttcagcactgatggcctggctgctattgcttcg
aattgcaggaatctgagggaacttgatttacaggagaatgatgtcgaggatcggagtggt
cagtggctcaattgtttcccagagtcatttacttccctggtttcacttaatattgcatgc
cttgctggggaagtgagcttttcggcccttgagcgcctggttgcgaggtctcccaatcta
aagacccttgggctcaatcatgacatacctcttgataagctggctaacctccttcgacgg
gctccccaactggttgatattggcactggatccttttctgctgaacctcggccacaactc
ttttttaagttagcaagtgcctttgagggtagcaaggagctgaagagcctttctgggttc
tggtcagtgactccaacatatcttccagccttgtaccccatctgtgcaggtctaacatcc
ttgaacatgagttatgccactgtccagtgtcctgaactcaccaagctcattaccaagtgc
cggaacttgcagcgattattggtcttagactacattgaggatgctgggctcgaagccgtg
gctgcatgctgtaaagatcttcaagagctgcgtgtattcccgtctgacccttttggtaca
gaacagcatgtatctttgacagagcgaggcctagttgccatttctgacggctgtcctaag
ctcaactctgtcctgtatttctgccaccagatgtccaatgctgctcttcatactgttgct
cgaaattctcctaatctcaccagattccgcctatgcattattgagccaagaacaccggat
tacctcactcaagaaccacttgacacagggtttggtgcgattgtaaagttctctaaagat
ctccggcgcctgtcactctcagggctcctgacggaccgtgtatttgagtacattggagct
catgctaagaaacttgagatgctttctgtggcttttgctggggacagcgacttggctctt
catcatatattgtccggctgcaagagtctccggaagttggagattagggattgcccattt
ggtgataaggccttattggccaatgctgccaaatttgagacaatgcgatccctttggatg
tcttcttgctctgtgagcttacaagcttgtaaattgctggcagaaaagatgcccaggctc
aacgtagaggttattgacgagagaggacagccagagtcacggccagacaattgtcatgtt
gagaagctctatgtctacagaagtattgctgggccaaggtctgatatgccagaatttgtt
cgaaccatgtaa
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