Aristolochia californica: 137959763
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Entry
137959763 CDS
T10486
Name
(GenBank) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137959763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137959763
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137959763
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
137959763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
137959763
NCBI-ProteinID:
XP_068663210
LinkDB
All DBs
Position
Unknown
AA seq
327 aa
AA seq
DB search
MRELKLSLNQTQKVRLQSALQELQDLSSKVNSSATVTVADTIPVNHEDGVLKGHGTSELN
NEVVATLCGVVERVNKLVYVRALRARYKPEIGDIIVGRVIEIAPKRWRLEINFSQYAVLM
LSSMNLPDGIQRRRTVVDELNMRSIFEESDVVCAEVRGFQHDGSLHLQARSQKYGKLERG
QLLTVPPYLVKRRKQHFHHLENYNVDLILGCNGFIWVGEQIEPRENDMMDIHDDKSTESG
KTNSKLVTLEEQERVFTPLETRQHICRIANAVRVLSLLGFTLSVEVILSTVEASLSIDVK
DMLGAEFYVQTAEREVQRRKTLTKKKG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagagagctcaagctttctctaaatcaaacacagaaagttcgactccaatcagcgttg
caggaactgcaggatttgtcttctaaagtgaactcctctgctactgttaccgttgccgat
actattccggtcaaccacgaagatggtgtcctcaagggacacggtacatccgagcttaat
aatgaagtagtggcaactttatgcggtgtggttgagcgtgtgaacaagttggtgtatgtc
cgtgccttaagagccaggtacaagcctgagattggagatatcattgttggtcgtgtcatt
gagattgctccaaaacgctggaggttagagataaatttcagtcaatatgcagtattaatg
ctttcatcaatgaacttgccagatggtatccagagacgacggacagtggttgatgaactc
aacatgcgtagtatttttgaggaaagtgatgttgtttgtgcagaagtacgaggttttcag
catgatggaagtttacacctgcaggccaggagtcagaagtatggaaagcttgagagaggt
cagttgctcacagtgcctccatacttggtcaaacggagaaagcaacatttccaccacctt
gaaaattacaatgttgatttgattctaggttgcaatggattcatatgggttggtgaacag
atagaacctagagaaaatgatatgatggacatccatgatgataaatctactgaaagtggt
aaaaccaactcaaaactagtcaccctagaagagcaagaaagggtgtttaccccattggag
acgaggcaacacatatgtaggatagctaatgcagttcgagtcctatctctgttgggtttc
actctgtcagttgaagtgattcttagtactgtggaggcctctttgagcatcgacgtcaaa
gacatgcttggagcagagttctatgttcagactgctgagagagaggtgcagagaaggaag
acattgaccaaaaagaagggctag
DBGET
integrated database retrieval system
