Aristolochia californica: 137959836
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Entry
137959836 CDS
T10486
Name
(GenBank) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137959836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137959836
03036 Chromosome and associated proteins [BR:
acak03036
]
137959836
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137959836
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137959836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
137959836
NCBI-ProteinID:
XP_068663320
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGTSSVFGGSNASNNPFTPKPFGSTTPFGSQTGGSIFGGTSTGVF
GAAQSSSPLGSTPGFGASSTPTFGSSAFGASSTPAFGSSSSSFGGSSIFGQKPAIGGFGS
TTGQTSPFGSTLQQSQPAFGSSLFGSSTPFGAASTPTFVASSAPAFGASSTAAFGATTTP
AFGVNTAPTFGSTSTPTFGNTGSVFGSSSTPGFGSSATPAFGASSAPVFGSSSVSAFGSS
STPAFGASSTPPFGASSTPSFNFGSSPTFGQSSSAFGSTPFGTTPFGAQSSPFGAQSTTT
TFGNPGFGQSGFGSQRGGSRVAPYAPTAEVDGGSGTQPAGKLESTSAMPAYKDKSHEELR
WEDYQLGDKGGPNPAGQPASGIGFSAPAQSNLFGTTSTFAQTSANPFSSTTSTNPFASKT
PTFGSTGFGSSPSPSFSSPFGTSASPFGTTTSSTTPSLFGATTTPAFGASSSPSLFGGSS
TPAFGASSSPSIFGSASAPGSSPAFGSGLTFGNTQASGLFQSSSPLGQTASPAFGSGLTF
GNTQASGLFQSSTPLGQTASGFGSTAPAFGQTTSSTFGQPNPFGTPSTGFGGNLFSSSST
PSLLATSTSIGFGQTMPSLSSPFSAPTQTSGAFSFGNFGQPQFAPSSGFGGVSNNFGQGA
FGQYGTIQSNWVPQPVPVSNPFGTLPAMPQMSIGRAGSSSSIQYGISNMPVADKPAPVRV
SSLLTTRHLSQRRTKLPPRKYHPKTDGPKIPFFSDEEEAPSTPKADALFIPRENPRALVI
RPMEPWASRASAEKSVLKDVSTPIHENGKSSGDASPSAVNGIFSDDGHDKIVVENGFDGQ
HNTSPARPKQKANGVLHEDHGQKGESYISLSGHRAGEAAIVYEHGADIEALMPKLRHADY
YSEPRIQELAAKERAEPGYCRHVKDFVVGRHGYGSIKFLGETDVRRLDLEALVQFNNKEV
IVYMDESKKPPVGQGLNKPAEVTLLNIKCFNKKTGQQYTDGPNVEKYKDMLKKKAGDQGA
EFVSYDPVKGEWKFRVSHFSRYELGDEAEDDPDSFPVGAADVNVEWWLMFIQKTRIDVVE
QRENCLGDLHC
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcaactaatccttttgggcagtcttcaagtagtccatttgggacttcctca
gtttttgggggaagcaatgcatctaataatccttttactcctaaaccttttgggagtact
actccttttggttcacaaacgggtggatccatatttggtggtacatcgactggtgtattt
ggagcagcacaatcttcttcacctctaggttcgacacctggatttggtgcttcttccaca
ccaacttttgggagctctgcttttggtgcttcatccacaccggcatttgggagtagctca
tcgtcctttggaggatcttctatatttgggcagaaacctgctatcggagggtttggctca
accactggtcaaacaagtccatttggtagcacacttcagcaatcgcaacctgcatttggt
agtagcttgtttggttccagtactccttttggtgctgcaagtacaccaacttttgttgca
tccagtgcccctgccttcggtgcatccagtactgcagcttttggtgctacaacaactcca
gcttttggtgtgaacacggctcctacttttgggtctacgtcaaccccaacatttggcaac
acaggctctgtgtttggctcatcaagcacaccagggtttggttcctcagctactcctgcg
tttggcgcatctagtgctcctgtttttggatcttctagtgtctctgcctttggctcatcg
agtactcctgcatttggagcttcttctactccaccttttggtgcttcaagcaccccatct
tttaactttggctcttcacctacttttggccaatcaagttctgcatttggcagcactcca
tttggcacgactccctttggtgcacagagttccccttttggagcccaatcaacaacaaca
acttttggcaatcctggttttggtcagtctggatttgggagtcagcgtggtggaagcaga
gttgcaccatatgcaccaacagctgaggtggatggcgggagtggaacccagccagctggc
aaactagagtctacatcagctatgcctgcttacaaagataagagtcatgaagaattacga
tgggaagattatcaactgggagacaaaggtggaccaaaccctgccggtcagcctgcaagt
ggcattggttttagtgcaccagcacagtcaaacctgtttggcacaacaagcacatttgct
cagacaagtgcaaaccccttctccagcactacttcaaccaacccctttgcttcaaaaaca
ccaacatttggttctactggttttggttcatctccgtcaccatcattcagctctcccttt
ggtacctcagcaagcccctttgggactaccacctcatccactactccctccttgtttggg
gccacaactacccctgcatttggagcgagttcctctccatccttatttggtggatcaagc
acacctgcatttggtgccagttcatccccttcaatctttggttctgcatcagcacctgga
tcaagtccggcttttgggtctggcttgacctttggaaacacccaggcctctggacttttt
cagtcaagcagtcctcttggacagacagcatctccggcatttgggtctggcttgaccttt
ggaaacacccaggcctctggactttttcagtcaagcactcctcttggacagacagcatct
ggctttgggtcaaccgctcctgcttttggacaaactactagttctacctttggtcagcct
aatccttttggaacaccttcaactggatttgggggaaatttgttttcaagcagctcaacg
ccctccctgcttgctactagcacttcaattggttttggccaaacaatgccttctctttca
tctccattttctgcacccactcagacatccggtgctttttcttttggaaactttggtcag
ccacaatttgctccttcaagtggttttgggggtgtttcaaataactttggtcagggagcc
tttgggcaatatggtactattcagagtaattgggttccacaaccagtcccagtttcaaac
ccttttggaacattgcctgccatgccacaaatgtcaattggccgtgctgggtcttcctct
tctattcagtatggaatttctaacatgcctgttgcggacaagccagcccctgttagagtt
tcgtctttgttgactacaagacacttgtctcagaggcgtaccaagctacctcctaggaaa
taccatccaaagactgatggtccaaaaataccattcttcagtgatgaagaagaagctcca
agcacgcctaaggctgatgctcttttcatccccagggaaaaccctcgggctcttgtaatt
cgtcccatggaaccatgggcatctagagcttctgcagaaaaatctgtattgaaagatgtg
tctactcctattcatgaaaatggtaaatcttccggggatgcatctccttctgctgtaaat
ggtatctttagtgatgatggtcatgataaaatagtcgtggagaatggctttgatgggcag
cataatacttctccagccagacctaagcagaaggcaaacggagttctccatgaagaccat
ggccagaagggagagtcatacatttcattatcaggacaccgagctggggaagcggcgata
gtctatgagcatggggctgacattgaagctttaatgccaaagctacggcatgctgactac
tactctgagcctcggatccaagagttggctgccaaggagcgggcagagcctggctactgc
cgccatgtgaaggattttgtggtgggcaggcatgggtatggaagcataaaattccttggg
gaaacggatgttcggaggcttgacttagaggcccttgtgcaattcaacaacaaagaggtt
atagtgtacatggatgaaagtaagaagcctccagtagggcagggtcttaacaagcctgca
gaagttacccttctaaacatcaaatgttttaataagaaaactggccaacaatacacagac
ggcccaaacgtggaaaagtacaaggacatgctgaagaagaaagctggggaccagggtgct
gagtttgtttcttatgaccctgtgaaaggggagtggaaatttagagtgagccacttcagc
cggtatgaacttggggatgaagctgaggacgatccagattctttccctgttggtgctgct
gatgtcaatgtggaatggtggttgatgtttattcagaaaacacggattgatgtagtggag
caaagggagaattgcctcggtgacctgcactgttga
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integrated database retrieval system
