KEGG   Aristolochia californica: 137960474
Entry
137960474         CDS       T10486                                 
Name
(GenBank) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
acak  Aristolochia californica
Pathway
acak03018  RNA degradation
acak03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acak00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137960474
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137960474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acak03019]
    137960474
   03041 Spliceosome [BR:acak03041]
    137960474
Messenger RNA biogenesis [BR:acak03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137960474
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137960474
Spliceosome [BR:acak03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137960474
 Complex C
  U2 snRNP components
    137960474
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF150_C
Other DBs
NCBI-GeneID: 137960474
NCBI-ProteinID: XP_068664209
LinkDB
Position
Unknown
AA seq 93 aa
MLFFSYFKELVGKEVTVELKNDLAIRGILHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIDILHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgcttttcttttcatatttcaaggagttagtaggcaaagaagtgacggtggagttgaag
aatgatctggcaattcgagggattctgcactctgtagatcaatatctcaatataaagctg
gaaaacacgagggtggtcgatcaagacaaatatcctcacatgttatcagtgcggaattgt
ttcataagaggatcagtggtgaggtacgttcagctaccccctgatggagtggacattgat
attcttcatgatgctacaagaagagaagcccgcggtggttga

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