Aristolochia californica: 137960481
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Entry
137960481 CDS
T10486
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 24
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137960481
Spliceosome [BR:
acak03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137960481
Complex B
137960481
Complex C
U2 SnRNP specific factors
137960481
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Other DBs
NCBI-GeneID:
137960481
NCBI-ProteinID:
XP_068664218
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Position
Unknown
AA seq
771 aa
AA seq
DB search
MSKRKFGFEGFGMNRPATYNFERSQAPQRLYVPPTARGAHDNYEDHDLDNIEYDDGEPVE
RSGAQQDGGGGGDAEIDPLDAFMEGIHEEMRAPPPPKAKEKAEKYRDDEEDDPVESFLRA
KKDVGLTLASEVLQAGYNSDEEVYAAAKAVDAGMIEYHSDDNPIIVDKKNIEPIPALDHS
SIDYEPFDKDFYEEKPSISGMSEQEVAEYRKSLAIRVSGFDVPRPTKLFEDCGFSSTLMG
AISKQKYERPTSIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMVVHIMDQPELQKEEG
PIGVICAPTRELAHQIYLEAKKFSKSNGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGR
LIDMLKMKALTMSRATFLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVE
KLAREILVDPVRVIVGEVGMANEDITQVVNVIPSNAEKMPWLLEKLPGLIDNGDVLVFAS
KKATVDDIETQLIQSGFKVGALHGDKDQASRMEILQKFKSGVYHVLVATDVAARGLDIKS
IKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLITQKDARFAGELANSLVAAGQNVS
VELMDLAMKDGRFKAKRDSRKGSGKRAKGGGGGGSGRGVRGVDFGLGIGYNPESTNPSTQ
SVSNRSSTVNALKTGMMTQFKSNFVAASDSQTSSRNNSSAFANKRTALPGFISGGSIGGE
STVAQAFNSLSATFRPADSAGDSSKDNGNKKNLESSRDRPRERKRPSGWDR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaaattcgggttcgaaggcttcggcatgaaccggccagcgacctacaat
tttgagcgctcacaggcccctcaacgcctttacgtgccgcccaccgcccgtggagcgcat
gataattatgaagaccacgatctcgacaacattgaatacgatgatggcgaacccgtagaa
cgttcgggggcgcaacaggatggtgggggcggtggtgatgcagaaattgacccccttgat
gccttcatggaagggatccacgaagagatgcgggcgccgccgcccccaaaggcaaaagag
aaagcggaaaagtatagagatgacgaagaagatgatcccgtggagagttttctaagggca
aagaaggatgttgggctaacactggcttcggaggtacttcaggctgggtacaattcggat
gaagaggtttatgctgctgcaaaggctgtggatgcggggatgattgagtaccattcggat
gataatccaatcattgttgataagaagaacattgagccaattccggctttggaccatagt
agtatcgattacgagccatttgataaggatttctacgaggaaaagccttccatttcagga
atgagtgagcaagaggtagctgaatataggaaaagtctggctatacgtgtctcagggttt
gatgttcctaggccaactaagctgtttgaagactgtggattttcttcaactcttatgggt
gctatttccaaacaaaaatatgagagaccgacatctattcagtgccaggcgttaccaatt
gtactctctggtcgagatattattggcattgcaaaaactggttctgggaaaactgctgca
tttgttctcccaatggttgttcatatcatggaccaacctgaactccagaaagaagagggt
cctataggtgtcatatgtgcacccactagagagttagcccatcaaatatatttagaggca
aagaaattttcgaagtctaatggaataagagtttctgcagtgtatggtggaatgtctaaa
cttgaacagtttaaagaactcaaggcaggctgtgaaatagtagttgccactcctgggaga
ttgattgatatgctgaagatgaaagctttgaccatgtcgagagcaacattcctagtcctt
gatgaagctgatcgaatgtttgatcttgggtttgagcctcagataaggtccattgtgggc
cagatcagacctgaccggcaaactctgctcttttctgcaactatgccccgcaaagtggaa
aagttggctcgtgaaatccttgtggaccctgtgagagttatagtgggtgaggttgggatg
gctaatgaggacattacccaagttgtaaatgtgattccttctaatgctgagaaaatgcct
tggcttcttgagaagcttcctggattgattgataatggagatgttctagtttttgcttca
aagaaagcaactgtggatgacattgaaactcagcttatacaaagcgggtttaaggttgga
gctctccatggtgataaagaccaggcatcgcgaatggaaattttacaaaagtttaaatca
ggggtttaccatgttcttgttgcaactgatgtggctgcccgtgggcttgatataaaatca
atcaaatcagtggttaattttgatattgctagagatatggacatgcatgtacatcggatt
ggtaggacagggcgtgctggagataaagatggcactgcctacactcttatcacacagaaa
gatgctcgttttgcgggtgaactggcaaacagtttagtagctgctgggcagaatgtctct
gtggaactgatggatcttgccatgaaggatgggagatttaaagccaagcgagattcaaga
aaaggatctgggaaaagagcaaagggtgggggtgggggtggaagtgggcgaggtgtacga
ggagtggattttggccttggaattggctacaatcctgagtcaaccaacccatcaactcag
tccgtttcaaatcgatcatctacagtgaatgcactaaagactggaatgatgactcagttt
aagagcaactttgttgctgcatcagattctcaaacaagttcaaggaataattccagtgcc
tttgctaataagagaacagccttacctggctttatttctggtggttccataggtggagaa
tccaccgttgcacaggcatttaattcattaagtgccacttttaggcctgcagatagtgcg
ggtgacagttccaaggataatggaaataagaagaatttggaaagttcaagagataggccc
cgagaaagaaagcgtccatcaggttgggaccgttag
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