Aristolochia californica: 137960632
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Entry
137960632 CDS
T10486
Name
(GenBank) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137960632
03036 Chromosome and associated proteins [BR:
acak03036
]
137960632
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137960632
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137960632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
Spt6_S1
Tex_central_region
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
137960632
NCBI-ProteinID:
XP_068664397
LinkDB
All DBs
Position
Unknown
AA seq
1693 aa
AA seq
DB search
MAGRAIVSDEEDEIEEEVDEREVRDTEGADIDEGNDDDEDNEEGQDEYEKDDFIVDDVEE
EEEQEEEEEEKDSDDKEKHKKKKRRKKESEKNYVLDEDDYELLQDNNITGFHRPKIGSKK
FKRLKKAGRNSEQEEQTGFSDEEEIGRGGRSGRTAEEKLKRSLFGDDDGAPLEDIAEEQQ
PEEEEDGDIGEEDEMADFIVDEEDVDENGAPVSRKKFSKKKSRQAPGVPSSAFQEAHDIF
GDVDELLRVRKEGLARSDDMHKGLEDEFEPFILTEKYMTKKDNMIRETDVPERIQLTEEV
TGLFPIDDRSIEDESTWVYNQLMSSDASPFFGYMELLGDINKEDIRNVLALHHVQKLDIP
FIATYRKEKCLSLLKEPEQDVMDNEDKPEKPKIKWHRKLWAVQNLDKKWLLLQKQKRALR
LYYKKRFQEEAQRVDHETRLNLNHDLSKSILKSLENAETDCEVNDVDMKFILHFPPGELG
AEEGRYKRPQRKSKYAEYKNAGLWEVVGKFGFSSEQFGSLLTLEQMRQDELEDAKETPAE
IAMNFTCNMIQTPREVLDRARYMAAFEISCEPCVRKHVRSIFLEKVVVSTCPTIKGKTAI
DSFHQFAGIKWLRNKPLSEFKDSQWLLIQKAEEEKLLEVTIKLPEDTQNKILNDFNENYL
SDGVSKSAQLWNEQRKLILNGALFSFLLPSMAKEVRILLTTRAKYILRMEYGGQLWSKAS
VAPYQRKDNEVGMDEDTVPRVMACCWGPGKPATTFVMLDSSGEVLDVLYAGSINTRSQSV
EDQQRKKYDQQRLLKFMTDHQPQVVVLGAVNLSCTHLKDELFEIIFKIVEEHPTEVGQEI
DEVKVVYGDESLPHLYENSRISSDQLPKQQGIVRRAVALGRYLQNPLAMIASLCGPAREI
LSWKLSPLEHLLTPDEKYEMIEQVMVDATNQVGLDINLAASHEWLFAPLQFISGLGPRKA
SGLQRALVRVGSVFSRKELMTDFIKKKVFFNAVAFLRVCRSGVATTSTRIVDLLDDTRIH
PESYKLAKSMAKDVYDEDVQGNQNDSDDEVQEMAIEHVREQPKLLRVLDIDEYAKSGEER
LGERKKETLYDIKMELLHGFQDWRTPYSEPAQDEEFYMISGETEESLAVGRVVQATVKRV
QIERLTCALDSGLTGLIMKKDDFHQRRRYLQQDDLDFTPENFPLGMIIDCTVEKIQKNRY
LVFLTLGEGKGETLPNLDPYYYEGESNLWTDQEKARKEKELAKKHFRPRMIVHPRFQNLT
ADEAIEFLSEKEPGESIIRPSSRGASYLTLTLKVYDGVYAHKDIAEGGKDHKDITSLLRI
GKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLGHRKFKRGTKAEVDELLGAEKAENPAR
IVYCFGICHEHPGTFILSYIRTNPHHIHITLYPKGFRFRSNFFDNIDRLVAHFQKHIDDL
PREATQPNRSIAAMVPMKSPASVGFSAASGGWGGSQANSDGGWMSGHMNSQRERYSASGS
RTGRNDYRNGDSRDGHPSGAPRSHGGHGQGRVAGSYYDGGNDNGGASKWGSASKGGDGWS
NFPSSKVSSSPGRDAFSGGWDSSGSGSSGGAGGTRNGGSGNHENSNVEWGSAGGHRDSDS
GGWGSSNRSWSNSIRESGNGSSNGVWVSSARGGDGGSVAAATDNLGWGGRGEGGSGNAIG
SRGWSSGGSGGWS
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagagcaattgtttcagacgaggaagacgaaatcgaggaggaggtggacgaa
agagaagttagagataccgaaggtgctgatatagatgaagggaacgatgatgacgaggat
aacgaagagggtcaggatgagtatgagaaggatgactttatagtagatgatgtggaggaa
gaggaggagcaagaagaagaagaagaggaaaaagatagtgatgacaaagagaaacataag
aagaaaaagaggaggaaaaaggagtcagagaagaattatgttcttgatgaagatgactac
gagttgctccaggacaataacatcacaggattccatcgccccaaaattgggagcaaaaag
ttcaagcgtttgaagaaggctggccggaactctgagcaagaagagcagactgggttctct
gacgaagaagaaattggtagaggtggtagaagtggccgtactgccgaggagaaactgaag
cgcagtttatttggtgatgatgatggagctcctcttgaggatattgctgaagagcagcag
cctgaagaagaggaggatggagacattggcgaggaagatgaaatggcagattttattgtg
gatgaagaagatgttgatgaaaacggagcccctgtaagcaggaaaaaatttagcaagaag
aagtcaaggcaagcacctggtgttccatcctctgcattccaggaggcccatgacatattt
ggagatgttgacgaactcctgcgagttcgcaaggaaggccttgctaggagtgatgacatg
cacaagggcctggaagatgaatttgaaccttttattcttacagagaaatacatgactaag
aaggataatatgatcagggagactgacgtgcctgagaggattcagttgacggaagaagtt
actgggctttttccaattgatgatagaagcatagaagatgagagtacctgggtgtacaac
caactgatgtcttctgatgcctcaccattttttggttacatggaactccttggtgatatc
aataaagaagatattaggaatgtcttggccctacaccatgttcaaaaacttgatattccc
ttcattgctacttatcggaaggagaagtgtctgagccttttgaaggagccagagcaagat
gtgatggataatgaagataaacctgaaaaacctaaaattaagtggcataggaaactatgg
gctgtccagaatctggataaaaagtggttgctacttcaaaagcagaagagagctcttcga
ttatactacaaaaagcgttttcaggaagaagctcaaagggttgatcatgaaacaagactc
aacttaaaccatgatctttctaaatcaattctcaagtcccttgagaatgctgagacagac
tgtgaagttaatgatgttgatatgaagttcattctgcattttccacctggcgaattaggt
gcggaagagggccgatataagaggccacagcggaagtcaaagtatgccgagtataaaaat
gctggtctttgggaggtcgttggcaagtttggtttcagctcagagcagtttggttcactt
ctaaccttagagcaaatgcggcaggatgaactggaggatgccaaggaaactccagcagaa
attgctatgaattttacctgcaacatgattcaaacccctcgagaggttcttgatcgtgcc
agatacatggctgctttcgagatcagctgtgaaccttgtgtgagaaaacatgttcgaagt
atctttttggagaaagttgttgtctcaacttgccctactattaaagggaaaactgccata
gattccttccatcagtttgctggcatcaaatggttgcgtaacaagccactatctgagttc
aaagattcacagtggctcctgattcaaaaggctgaagaagagaagcttcttgaggtcact
ataaaattgccagaagacacacagaacaaaatattaaatgattttaatgagaattatctt
agtgatggagtgagcaaatctgctcagctttggaatgaacaaagaaagttgatactcaat
ggagccctctttagttttctgttaccttctatggcaaaggaagtccggattttgctaact
acaagagccaaatatattcttcgcatggagtatggaggacagttgtggagtaaagcatcc
gttgcaccataccaacggaaggacaacgaagttggcatggatgaggacactgtaccaaga
gtcatggcatgctgttggggcccaggaaagccagcaaccacatttgtcatgttggattca
tcaggggaagtcttggatgtgctgtatgcaggttccattaatactcgttcccagagtgtt
gaagatcagcaaaggaagaaatatgaccaacagcgtctcctcaagttcatgacagaccat
cagcctcaagtagttgtattgggagctgtgaacttgtcttgtacacatttgaaagacgaa
ctatttgagattattttcaaaattgttgaagaacatcctacagaagttggtcaagaaata
gatgaggtgaaggttgtttatggagatgaatctttgccccatctctatgagaactctcga
atttcgtcagatcaactcccaaaacaacaaggcattgttagacgggctgttgctcttggt
cgctaccttcaaaatcctttggccatgattgcatcactatgtggccctgcacgggagata
ttatcttggaagctgagcccattagaacatcttctcactcctgatgagaagtatgagatg
attgagcaggtaatggttgatgctactaaccaggttggtcttgacataaacctggctgca
agtcatgaatggctttttgctccactccaatttatttctggcttgggaccgaggaaagca
tctggcttacagagagcattggtcagggttggatctgtttttagccgtaaagagcttatg
actgatttcataaagaaaaaagtattctttaatgcagttgcttttcttagggtttgccgg
agtggagttgcaaccactagcactcgcatcgtagatttgctagatgatacaaggattcat
cctgaatcatataaacttgccaaaagtatggctaaggatgtatatgatgaagatgttcag
gggaatcaaaatgattcagatgatgaagtgcaagagatggccattgagcatgttagggag
cagccaaagttgctcagggttcttgatattgacgaatatgctaagagtggtgaggaacgg
cttggggaacgaaaaaaagaaactctatatgatataaagatggagctgctgcatggattt
caggactggaggaccccatactctgaaccagcccaggatgaagaattttatatgatttct
ggtgaaacggaggagtccttagcagtgggacgagtggtgcaggcaacggttaaaagggtt
caaatcgaaaggttaacttgtgcactcgattcaggtttgacaggtttgataatgaaaaag
gatgattttcatcaaaggaggaggtacctccagcaggatgacctggactttacccctgaa
aactttcctctaggaatgataatcgactgcacggttgaaaagattcagaaaaatagatac
cttgtttttcttactttgggggaagggaagggcgaaactttaccaaatttagatccatac
tattatgaaggagagagcaatttatggactgatcaagagaaagctcgcaaagaaaaggaa
cttgctaagaagcatttcaggcctaggatgattgtacatcctcgttttcaaaatttgaca
gctgatgaagcaatagagttcctatcagagaaggagcctggtgaaagcatcatccgccca
agttctaggggggcatcatatttgactttaacgctgaaagtgtatgatggggtctatgct
cataaagatattgctgaggggggtaaagatcacaaggacatcacaagtttgctccgcatt
gggaaaactttaaagataggggaagacacttttgaggatcttgatgaggtcatggatcgt
tatgtcgatccactggtggctcacctaaaggctatgcttggacaccgaaaattcaaacgt
ggcacaaaagcagaagttgatgagcttctaggagcagagaaagcagagaacccagcgagg
attgtttactgttttgggatctgtcatgagcacccaggaacttttattttatcttatatc
cggacaaatcctcatcacatccatattactctctatccaaagggtttcaggtttcggtca
aatttctttgataatattgatagacttgtggcacatttccagaaacatattgatgatttg
ccacgggaggcaacccaacccaaccgatctattgcagcaatggtgcccatgaagagcccc
gctagtgtggggttctctgctgcaagcggtggctggggtggctctcaagccaatagtgat
ggtggatggatgagtggtcacatgaactctcaaagagagagatactctgcatcaggctca
agaacaggtagaaatgattacaggaatggtgatagcagagatgggcatccaagtggcgca
cctaggtcccatggtgggcacggacagggccgtgtggcaggctcatattatgatggagga
aatgacaatggaggtgcttccaaatggggctcggcatccaaaggtggtgatggatggagc
aatttcccgagttccaaagtcagcagttcacctggtagagatgcattttcaggtggatgg
gacagcagcgggagtgggagcagtgggggtgctgggggaactcgtaacggtggcagtggc
aaccatgagaacagcaatgttgagtggggtagtgctggaggtcatcgtgatagtgacagt
ggcggttggggcagtagtaaccgtagctggagtaacagcattcgagaaagtggtaatggg
tccagcaatggtgtctgggttagcagtgcccgtggaggggatggtggttctgtggcagca
gcaactgataacttgggatggggtggacgtggggaaggtggatctgggaacgcgattggc
agtcgaggatggagtagtggtggtagcgggggctggtcatag
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integrated database retrieval system
