Aristolochia californica: 137961920
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Entry
137961920 CDS
T10486
Name
(GenBank) SWI/SNF complex subunit SWI3A-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137961920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137961920
03036 Chromosome and associated proteins [BR:
acak03036
]
137961920
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137961920
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137961920
PBAF complex
137961920
GBAF(ncBAF) complex
137961920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF3536
DUF7685
Motif
Other DBs
NCBI-GeneID:
137961920
NCBI-ProteinID:
XP_068664661
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MQSAEGGSTPANDSDLDLYTIPGYSSWFSWDVIHDNEKLHHGEFFNNSSLSKNPRVYKQY
RDFIINKYREDPSRRLTFNEVRKSLIGDVSSLYKIFQFLDRCGLINFSAPPPPLSNDDPT
DESESEEHIVKVDEGPPNGIRVVEYPGSTKMVGAVTRASEGSNDETSAARFTLPPLTSYA
DAFNEIFCDNCGERWSINYYESAKDYSVICLKCFQNQNFRKENSAQDYKRKEPNTIHISP
VWTDEEKALLLEALVKYGDDWSLVAQHVLTKSKLDCILHTIQLPFGEHILGLPGEKADAR
SKDNIVNNVRPTEISGAEAIKTEEHDKEITEHAEEGKSSSPPPKRRRFTLFADDGGSLMK
QVALLSTEMGPQVAAAAARAAVTALCNEIPYAKKIFCLDDSNELQDNCVRFLSVEDPEGG
KLEDSETVGHCPEKTSGPGTIQLRAAVATALGAAAAHSKLLADQEDREIEQLTATVVELQ
MRKLRCKVKYFEELESIMKMEYEQIKKMKESIIAERIEVLRKVFQAGISRWKDHNSVKPF
TVSGIML
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgctgaggggggctcgacccctgcgaacgactctgaccttgatctctacacg
atccccggctactcgagttggttctcatgggacgtaatccacgacaatgagaagctccac
cacggcgagttctttaacaactcctccctatcaaaaaaccccagagtctacaaacagtac
cgggacttcattatcaacaaatacagggaggacccttctcgccgactcacattcaacgaa
gtccgcaagtcccttatcggcgatgtctccagtctctacaaaatctttcaatttctcgac
cgttgtggcctgatcaatttcagtgcaccccctccgccgttgtctaatgatgatcccacg
gatgagagcgagagcgaagagcatattgttaaggtcgatgaagggcctccgaatggaatt
cgggtggtcgaatacccaggttcgacgaaaatggtgggggcggtaacaagggcttctgaa
ggtagcaatgatgaaacctctgctgcgaggttcacgttgccgcctctgaccagttacgcg
gatgcgtttaacgaaatcttctgtgacaactgcggcgagaggtggtcgataaattattat
gaatcggcaaaggattactctgtgatttgcttgaaatgcttccaaaatcagaattttaga
aaagagaattcagctcaagattacaagcgaaaagagcccaacaccattcacatatctcca
gtatggactgatgaagaaaaggcccttcttttagaagctcttgtgaagtatggggatgac
tggagccttgttgcacaacatgttctaacaaagagtaaactcgattgcatattacacacc
atacaactcccctttggtgaacatattttgggtctacctggtgaaaaggctgatgcaaga
agtaaggataacatcgtgaacaatgttagaccaactgaaatttctggagctgaggccata
aaaactgaggaacatgataaggaaattactgagcatgctgaagagggaaaaagtagcagt
ccacctccgaagagaaggcgttttactttatttgcagatgatggtggttcattgatgaaa
caggttgctctcttgtctacagaaatgggcccacaagttgcagcagctgctgccagggct
gctgttacagcattgtgcaatgagatcccatatgcaaagaagatattttgcttggatgat
agtaatgaactacaggataattgtgtcagatttctttcagtcgaagatcccgagggagga
aagcttgaagattcagaaacagtaggccactgtcccgagaaaacatctgggcctgggaca
atacagcttagagccgccgttgctacagctctgggtgcggcagcggctcattctaagcta
ctggcagaccaggaagatagagaaattgaacaactgacggctactgtggttgagctgcag
atgagaaagctaagatgtaaggtcaagtattttgaagagctggagtcgatcatgaaaatg
gaatatgaacagataaagaagatgaaagaatcaattattgcggagagaatagaagtactg
agaaaggtcttccaagcagggatctcaaggtggaaggatcataattctgttaagcctttt
accgtcagtggtatcatgttgtaa
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