Aristolochia californica: 137962030
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Entry
137962030 CDS
T10486
Name
(GenBank) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
acak Aristolochia californica
Pathway
acak03020
RNA polymerase
acak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137962030
09124 Replication and repair
03420 Nucleotide excision repair
137962030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137962030
03400 DNA repair and recombination proteins [BR:
acak03400
]
137962030
Enzymes [BR:
acak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137962030
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137962030
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137962030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
137962030
NCBI-ProteinID:
XP_068664837
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MYGGDEYDPANEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD
IEIRPESQHNPGRHSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA
PLYVDVTKRIIKKGHDCEEVTETQDFTKVFIGKVPIMLRSNYCTVYQNSEKDLTELGECP
YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFV
RMLSRASARGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMME
LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCET
KKAYYFGYIIHRLLRCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYV
QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLS
HLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANP
ILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEV
GVIRDIHLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETQEEGWNDLVAKGF
IEYIDTEEEETTMISMTINDLITARTNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
AIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENT
MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGQASRYTRRDHSTSLRHS
ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGC
KNKTDIVQVHIPYACKLLFQELMAMAIAPRMFTKEVKPFKDQKKKGA
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtacggaggagatgaatatgatccagctaatgaggacgaggaagagattacgcaggaa
gatgcttgggcggtgattagtgcctacttcgaagaaaagggccttgtcagacagcagctt
gattcattcgacgaatttatacaaaataccatgcaggaaatagtggatgaatcggccgat
attgagattcgacctgagtcacagcataatccaggccgtcattccgactttctcgagaca
atttataaaattagctttggccaaatctacttgagtaagccaatgatgaccgagtcggat
ggagaaacagcaacattgttcccaaaggctgcaagattacggaatttgacgtactctgca
ccactatatgttgatgtgacaaaacggattatcaagaagggacacgactgtgaagaagtc
actgaaacacaggatttcactaaagttttcattggaaaggttcctataatgcttagatcg
aactattgcactgtatatcaaaactccgaaaaggatttaacagaacttggagaatgtcca
tatgaccaaggaggttatttcatcatcaatggaagtgagaaagttcttattgcgcaagaa
aaaatgagcaccaatcatgtctatgtcttcaagaaaaggcagcccaacaaatatgcctat
gtagctgaggtccggtctatggcagagtctcaaaacaggcctccaagtagcatgtttgtt
cgtatgctttctcgagccagtgcgagagggggctcttctggacagtatattagggctaca
cttccttatattcgaaccgagattcccataattatcgtgttcagggcattaggttttgtt
gctgataaagatatattggagcatatatgctatgactttaatgatactcagatgatggag
ttattgaggccatcccttgaagaggcatttgttattcaaaaccaacaggttgcactagat
tacattggaaagcggggatcaactgttggtgttacaagagaaaaaagaatcaagtatgcc
aaggaaatacttcaaaaggaaatgctgcctcatgtaggcgttggggaatattgtgaaaca
aaaaaagcttactattttgggtacattattcaccgtcttttgcgctgtgcacttggtcga
aggcctgaagatgatagagatcattatggcaacaaaaggctggaccttgctggtccttta
cttgggggcctgtttaggatgttgttccggaagctgactagggatgtgagatcatatgtt
cagaagtgtgttgacaatggcaaagatgttaacttgcaatttgctatcaaagcaaaaacc
atcacaagtggtcttaaatattcacttgctactggtaactgggggcaagcaaatgcagct
ggtacaagagctggagtttcacaggttctgaatcgtttgacatttgcatcaactctttct
catttgcgaaggttaaattctcccattggacgtgaagggaagttggctaaaccgcgtcag
ctgcacaattctcattgggggatgatgtgccctgcagaaactccagaaggacaggcatgt
ggattggtaaagaatcttgccttgatggtgtacataacagtgggatcagcagcaaatcca
attttagaattcttggaagagtggagtacagaaaactttgaggaaatatctccagcagtt
attccgcaagcaaccaaaatctttgtcaatggttgctgggttggtattcatcgtaaccct
gaacttctggtgaagacactgcgtcagctaagaagacaggttgatgtcaatactgaggtt
ggagttatcagagacattcatttgaaagagctacggctttatactgactatggacgctgc
agtcgtcctttattcattgtagaaaagcaaaggctgttgataaagaaaaaggatattcgt
gccttgcagcaaagggaaactcaagaagaagggtggaatgatcttgttgcaaaaggattt
attgagtatatagacacagaggaagaagagactactatgatttccatgaccattaatgac
ctaataactgctaggaccaatccggaagaagcatactcagaaacctacacacactgtgaa
atccacccgtcactgatattgggtgtttgtgcttctattatcccatttcctgatcacaac
cagtctcctcgtaatacgtatcagtctgctatgggaaaacaagcgatgggtatttatgtc
accaactaccagttgcggatggatacccttgcttatgtcctttactatccccaaaagcct
cttgttactactcgtgccatggagcacttgcactttcggcagcttcctgctggcattaat
gctatagttgctattgcatgttattctgggtataaccaagaagattcagttattatgaac
cagtcttctgttgatcgtggcttctttagatcattattcttccgttcttatagagatgag
gagaaaaagatgggtaccctggttaaggaagagtttgggcgtcctaacagggaaaataca
atggggatgaggcatggttcttatgataaattggatgatgatggtcttgcacctcctggc
actagggtttcaggtgaagatgtcatcattgggaagacaacaccaattgcacaggatgag
tctcaagggcaggcatcccggtacacacggcgtgatcatagtacaagcttacgtcatagt
gaaagtggcatggtggatcaggtactgttgactacaaatgctgatggcttgaggtttgtg
aaagtgagaatgagatctgttagggtacctcaaattggggataaattcagcagtaggcat
ggtcaaaagggaactgttggcatgacttacacccaagaagacatgccttggaccattgaa
ggcataactcctgacatcattgttaatccccatgccattccctctcgaatgaccattggt
cagcttattgagtgcatcatgggaaaagttgcagcacacatgggaaaggaaggtgatgct
actcctttcactgatgtcacggttgataatatcagcaaagcccttcataaatgtggatat
cagatgcgtggctttgaaactatgtataatggtcacactggtcggagattgacagcaatg
atattcttgggccctacatattatcagagactgaaacatatggtggatgataagatacac
tcccgggggagagggccagtacaaattctcactaggcagccagcagaagggcgatctcgt
gatggaggcctgagatttggagagatggaacgagattgcatgatcgctcatggtgctgcc
cactttctgaaagaaaggctgtttgatcagagtgatgcctacagggtccatgtttgtgag
aagtgtgggctgattgccattgcaaaccttaaaaagaactcctttgagtgcagaggttgc
aagaataaaacagacattgtacaggtacacataccatatgcgtgtaaactgctcttccaa
gagctcatggccatggccattgctcctagaatgttcacgaaggaagtgaaacctttcaag
gatcaaaagaagaaaggagcatga
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integrated database retrieval system
