Aristolochia californica: 137962455
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Entry
137962455 CDS
T10486
Name
(GenBank) pre-mRNA-processing factor 39-1-like
KO
K13217
pre-mRNA-processing factor 39
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137962455
Spliceosome [BR:
acak03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
137962455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
NRDE-2
YmiD
UTP6_C
Motif
Other DBs
NCBI-GeneID:
137962455
NCBI-ProteinID:
XP_068665427
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MGDSETAVAHTSTMSEYPSRDCTSAEYPVVNSTTVPSGAPDPTSSVHTNTGAYAFPEGSS
LGDGVAYSTDANVQEAQDAAKIIGASNVATTENSAAEPSHIHTVGYFAATSNGVAENGSI
SAGTIMENEAEDSIAPSTEEDRLWSIVRANSLDFNAWTLLISETEKVSEGNILKIRKVYD
AFLAEFPLCYGYWKKYADHEARLGSVDKIVEVYEQAVQAVTYSVDIWLHYCVFAISTYED
PETIRRLFDRGLAYVGTDYLSAPLWDKYIEYEYSQQEWSRIATIYTRILENPIQQLDRYY
NSFKELVTHRPLSDILTVEEAAASIASLGAKETHETQGVEGEVHLDEHSSPKPGSAGLTD
AEELEKYVAVREELYKKAKEFDSKIIDFETAIRRPYFHVRPLDEQQLENWHNYLDFTERG
DDFNKVVKLYERCLIACANYHEYWMRYVLCMEANGSMEIASNALARATQVFVKRQPEIHI
FAARFKEQSGDVSGARSEYQLVHSGLSPGLIEAIIKHANMEFRLGSKEAAFSIYEEAIKI
EQGKEQSGILPMLLVQYSRFLYLVSGSIEKAREVLDGAFENVPLSKPLLEAVIHLEALNL
SPKRIEYLDSLIEKFITPSADNPTSPSAIDREELSCIFLEFLDCFGDMQTIKKADNRHAR
LFVCQRNTLESRKRNADDLLASEKAKLAKTGAGVPSQAQSLMGAYPNAQNQWAAGYGTQT
QAWSQTAPQMQGHQWPAGYTQQAAYTGYANYTGYTQPQVPASAPPAAAYGAYPSTYPSQQ
AFQQQTYVQGTPPNSSVTQQQTAAPQAYYGSYY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggggatagtgaaactgctgtagctcatacatcaaccatgtctgagtatccatcaagg
gattgcacttctgccgaataccctgtagtaaattctactactgtccccagtggtgcccca
gatccaacttcttcagttcatacaaacactggggcttatgcttttcctgagggttccagt
ttaggtgatggagttgcctacagtacagatgcaaatgtgcaagaagctcaagatgctgct
aagataatcggtgctagcaatgttgccacaacggagaattcagcagctgagccctctcac
attcacactgttggttattttgctgctaccagtaatggtgtagctgagaatggaagtatt
tcagctggaactatcatggagaatgaggctgaagatagtattgccccttctaccgaagaa
gacagactgtggagcattgtgagagcaaattctttggattttaatgcttggactctgctt
atcagtgagacagaaaaggtgtcagagggcaacatattgaaaattcgtaaggtgtatgat
gcatttctagcagaatttcccttgtgttatggttactggaagaagtatgctgaccatgag
gcacgtctgggctctgttgataaaattgtggaggtctatgaacaggcagtgcaggctgtg
acctattctgtggacatctggctgcattactgcgtgtttgcaatatcgacatatgaagac
ccagagaccattcgaaggctttttgatcgagggttggcatatgttgggacagattacttg
tctgcccctctctgggacaaatatatcgagtatgaatattcccagcaggagtggagccgt
atagctactatctacacaaggatacttgagaatcctatccagcagctggatcgttactat
aacagcttcaaggaactggtgacacatcggcctttatcggatatcctaactgtggaagaa
gctgctgcttccattgcatctttgggtgcaaaggagactcatgaaactcaaggagttgaa
ggtgaggttcatcttgatgaacattcatctcctaaacctggaagtgctggcttaacagat
gcagaggagttggagaagtatgttgccgttagagaagagctgtataaaaaagctaaagag
ttcgattctaagatcatcgattttgaaacagctattcggaggccatactttcatgtaagg
cctcttgacgaacaacaacttgagaattggcataactatctcgattttactgaaagggga
gatgatttcaacaaggttgtcaagttatatgaaagatgcctaattgcttgtgccaattat
catgagtactggatgaggtatgtgctatgtatggaggctaatggaagtatggagattgct
tctaatgcacttgcgcgtgctacccaagtgtttgtaaaaaggcaaccagagattcatata
tttgctgctagattcaaagaacaaagtggagatgtttctggggcccgttctgagtaccag
ctcgtgcattctggactttcacccggtctaattgaggccataattaagcatgcaaacatg
gaatttcgattgggaagtaaagaagctgctttttccatatatgaggaggcaattaaaatt
gaacagggaaaagaacagtccgggatcttgcccatgctccttgttcagtattcgcggttt
ctctacttggtttctgggagtatagagaaggcgagggaggttttagatggggcttttgag
aatgtgccactttcaaagccacttctagaggctgtaatacatctggaagcacttaacttg
tcacctaagcgaatagaatatttggattcacttatagagaaatttattactcccagtgct
gataaccctacctcaccaagtgcaatagatagggaggagttgtcttgcatatttttagag
tttttagattgctttggagacatgcaaacaatcaagaaggctgataaccgtcatgcaagg
ctgtttgtatgccaaaggaacacattagagtccagaaaaaggaatgcagatgacctgttg
gcttcagaaaaggctaaattggcaaaaacaggtgctggtgttccttcccaagctcagtct
ctgatgggtgcttatcctaatgcacagaaccagtgggctgctgggtatggcacacagacc
caagcctggtctcagactgctcctcaaatgcaagggcatcaatggcctgctggttacacc
caacaggctgcatatactggctatgccaattacactggctatacccagccccaggttccc
gcatcagccccacctgctgctgcttatggtgcttacccttcaacatatccgtcccagcaa
gcttttcagcagcaaacttatgtgcaaggcaccccaccgaattcttctgttactcagcaa
caaacagcagcacctcaagcatattatggcagttattactaa
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