Aristolochia californica: 137962799
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Entry
137962799 CDS
T10486
Name
(GenBank) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137962799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137962799
03009 Ribosome biogenesis [BR:
acak03009
]
137962799
Enzymes [BR:
acak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137962799
Spliceosome [BR:
acak03041
]
Complex A
U1 snRNP components
U1 related factors
137962799
Complex B
137962799
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
Helicases
137962799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137962799
NCBI-ProteinID:
XP_068665973
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNNRFDVRYGDPNSYRERRSDLVYPPLQLPPGAGPLGAGASGPNFGGPLPPFGASRPVPF
AFGRGGRGSGPAPPVPSAGGLSGFSKLTTGGGSSGFEPGREGGRGGGRVANDDRGRRAFD
GGARGGRGRNGGGRNGGGGRGFDRGSGIGHGGRGAFDGARGGGRSSGGDRGRSGRDSGRP
LRSDLNNVQLARESFENLIPIEKNFYVESLAVQAMPAEEVARYRMSRQIRVEGRDVPKPV
RTFAEANFPEYCLQVIRKSGFIEPTPIQSQGWPMALKGRDLVGIAETGSGKTLAYLLPAL
VHVNAQPRLAQGEGPIVLVLAPTRELAVQIQEEAAKFGSHSNVKSTCIYGGAPKGPQIRD
LRKGVEIVIATPGRLIDMLEMHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDR
QTLYWSATWPREVEALARQFLRDPYKAIIGSSDLKANQSINQIVEVIQESEKYQRLIRLL
TELVDGSRILIFLETKKGCDQITRQLRMDGWPALSIHGDKSQGERDWVLAEFKSGRSPIM
TATDVAARGLDVKDIKCVINYDFPSSLEDYIHRIGRTGRAGARGTAFTFFTHANGRFGKD
LIKILQESGQSVSPALASLGRFGGGGGTGGNFRSRGRGFGNKSLISGSNAIPLGGARKLW
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccgtttcgacgtcagatacggagaccctaattcctaccgcgaaagaagaagt
gacctagtatacccccccttgcaactaccgcctggcgcgggccccctcggcgccggcgca
tctggtcctaattttggtggtcccctcccaccttttggcgcttccaggcctgtcccgttt
gccttcggaagaggcggtcgcggttccgggcctgcgccgccggtcccgagcgctggtggt
ttgagtggtttctcaaaattaaccaccggaggcgggagctcgggtttcgagcccggacgc
gaggggggaagaggtggcggtagagtcgcaaatgatgatcgtgggaggagggcttttgat
ggaggcgcacgtgggggccgtggaaggaatggaggaggacggaatgggggcggtggtaga
gggtttgatcgaggaagtggtattgggcacgggggcaggggtgcttttgatggcgctcgc
ggaggtgggaggagttctggtggggaccgaggaagaagcgggagggatagtggcaggccc
ctaagatcagatttgaacaatgttcagcttgcgagggaaagcttcgaaaatttgatcccg
attgagaaaaatttctatgtggaaagtctggctgttcaggccatgcctgctgaagaggtc
gctcggtacagaatgagtcgacaaattcgggttgaagggcgtgatgttccaaagcctgtc
agaacttttgcggaggctaacttccctgagtattgcctccaggtgatcagaaaatctggt
tttattgaaccaacacctattcagtctcaaggctggccaatggctttgaagggtagggat
ttagttggtattgctgagactggttctgggaaaacattggcgtatctgctgccggcactg
gtccatgtcaatgcacagcctcgactagctcaaggtgagggtcccattgtgctggtctta
gcacctaccagggaattggctgttcagattcaggaagaagctgcaaagtttggctctcat
tctaacgtcaagagtacctgcatctatggaggtgccccaaagggaccacaaattcgtgat
cttcgaaaaggggttgaaatagtgattgcaacacctggccgtctaattgatatgttggaa
atgcatcacactaacttgcggagggtaacatatctcgtattggatgaagcggatcgtatg
ttggacatgggatttgagcctcagattcggaaaattatatctcagattcggcctgatagg
cagacattatattggagtgctacatggccaagagaggtggaggctttggctaggcaattt
ctccgtgatccatataaggcgatcattggatcctcagacctgaaagccaaccagtcaatt
aatcaaattgttgaagttatacaagagagtgaaaagtatcaacggctgatcagattgtta
acagaactggtggacgggagccggatccttatatttttggaaacaaagaaagggtgtgat
cagattactcgacagctcaggatggatggttggcctgccctgtccatacatggtgataaa
agccaaggggaaagggactgggtcttggctgagttcaaaagtggcagaagtcctataatg
actgccactgatgtggcagcccgtggtcttgatgtgaaagatataaaatgtgtcattaat
tatgattttccttcgagccttgaggactacattcacagaattggaagaacagggcgagct
ggtgcaagggggactgcattcaccttctttacacatgcaaatggaaggtttggtaaggat
ctcatcaagatcctacaagaatcaggccaatcagttagtcctgcacttgccagtttggga
cgatttggtggagggggagggaccggtgggaatttccgttcaagagggcggggttttggc
aacaagagtttaatttctggttctaatgccattccccttggtggtgcaaggaagttgtgg
taa
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