Aristolochia californica: 137962981
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Entry
137962981 CDS
T10486
Name
(GenBank) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
acak Aristolochia californica
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137962981
Transcription machinery [BR:
acak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137962981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
RFamide_26RFa
DUF4160
HTH_11
Motif
Other DBs
NCBI-GeneID:
137962981
NCBI-ProteinID:
XP_068666238
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGVVTVSSSASRAPFGIGTGFSSYHSPLKRHIFLAFKTDKGKNSALVAPQESVQIKAPKK
HQKGLRRATKTAKRVRAISTDGASSCTPDLDYNAAAAKLENIYKLSPAEVSDVEESEVIP
QLRRKTRKKSHGQKEKPWPETHVVVRNHRRKAGRLNLEKRIALKRKKDEEKDVSGQSEQK
KQEVSSRDVDRLAGDHTVSTDLVSPDWKKMKMPAVLSSSEHSWLFSLIQPMKALLHVKES
LLKDIGREPTDGELAEATNMTVKEAKTHIEDGQAARNKLIKHNLRLVLFVINKHYQEFAS
GQKFPDLCQAGVKGLITAIDRFEPKRGLRLSTYALFWIRHSIMRSLTLTSFTRVPFGLES
VRLEIQRAKTELSFELGRPPSDEEIIAKAGISPGRYYDVTKASKSILSLNAKHSTTQEEF
LKAIADIDGVSGDNRRQSALLRLAIDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAGN
LNVSREMVRKYEVKAFMKLKHPARVDYLRRYLV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttgttactgtttcaagttcagcttccagggctccatttggcattggtacagga
ttttcatcctatcattccccactcaaaagacacatattcttagctttcaaaactgacaaa
ggcaagaattcagcactggtggcacctcaggagtctgtacagataaaagcacccaaaaaa
catcagaagggattgaggagagctaccaagactgctaaaagagttcgagccatttccact
gatggagcttcttcctgcacaccagatttggattacaatgcagctgcagctaagcttgaa
aacatttacaaacttagcccagctgaggtctctgatgttgaagaatctgaggtgatccct
cagctacgacgaaagacaagaaagaaaagccatggccagaaagaaaagccatggccagaa
acccatgttgtcgtgaggaaccacagaaggaaggcagggcggttgaaccttgagaaaagg
atagctttgaaacggaagaaagatgaagagaaggatgtgagtgggcagtctgagcagaag
aagcaggaagtgagtagcagagatgtggatagacttgctggggatcacactgtttcaact
gatttggttagcccggattggaagaagatgaagatgccagctgtcctttcctcttctgaa
cattcttggctgttctcactgatacagcctatgaaggccctccttcatgtgaaggaaagc
ttgctaaaagacataggaagggaacctacagacggtgaactggctgaggcaacaaatatg
actgtgaaagaagctaaaacccacattgaggacggccaagcagcaaggaacaaactaatt
aagcacaatcttcgactagttttgtttgtaatcaacaaacactatcaagagtttgcaagt
ggtcagaagttcccagacctttgtcaggcaggagtcaagggtctcatcacagcaattgat
cggtttgaaccgaaaagaggacttcgactatccacctatgctctgttttggatacgacat
tctataatgcgttcattgactcttacaagctttacacgagttccctttggtcttgaatcg
gtcagattggagattcaaagggctaaaactgaattgtcttttgaacttggaaggccccct
tcagatgaggagataattgccaaagcaggaatttccccaggaagatattatgatgtaacg
aaggcttcaaagtccattctttctctcaatgcaaaacattcaaccactcaagaagagttc
ctaaaagctattgccgacattgacggtgtttcaggcgacaatagaaggcaatctgctctt
ctcaggctagctattgatgatgtgctggactcgttgaagcctaaggagagcttggtggtc
agacagagatatggactagatgggaaaggagaccgaacactcggggaaattgctggaaat
ttgaatgtgtcaagagagatggtcagaaagtatgaagtgaaagcattcatgaaactcaag
catccagctcgagtggattatcttcgtagataccttgtttga
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