Aristolochia californica: 137963657
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Entry
137963657 CDS
T10486
Name
(GenBank) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
Enzymes [BR:
acak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
137963657
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137963657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137963657
NCBI-ProteinID:
XP_068666913
LinkDB
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Position
Unknown
AA seq
608 aa
AA seq
DB search
MARRSLQRLCSDDQNQWRSKVKQVTKANFSLALEEIKTHINCSDFIAVSSQKTGAFSSPW
RRPLPFDTPEIAYRKAKDAAEKFEILQFAVCPFRIQGSKIVAYPYNFHLFPRDELNLNMP
SYSFACQTSFLESMTRQGVDFNVSIYEGISYLSRVQETKAKNRISDPIPSIISFTSSSSP
SVSDAIFMERIKSRIKYWRDSCRDSGKAADEVLVSSLRKIILGSEVYGSRPCISLDVCND
GQVQLINKVVKSFCGDLVPLVIPDRSGGPKTVKVVLTSSEEDMTLLKTELQNHEEEQNKQ
IRGFREVIDAMSNSHKPIVACNCLNDFTFIHSKFVAPLPPSMAEFLCSLKLVFSNIVDLN
HLWKEIGSLKKANNISAASNYLNRQFFVPFDMEIPLQAEEEEQKHHGYNVVRITNLFAKL
ASMLRLSPDSNTMLAHQSIEDFSNIFYPCSIGLEEPTDEDEVLMKNVKKVNTDDLVFLWG
FTSQISAGELKRQLSGAHSALSADFELRLVNRSCAILVFWTPGLAKALLQDIGSGAVESI
FLRELMSEGLKATGYEAYKRVCNLGIPEADLADCLDKVLAEATDDIIRRREASEIYWSSE
DVIRLNEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcttgcagaggctgtgctcagacgaccagaatcagtggcgttcgaag
gtgaagcaagtgactaaggccaacttctctcttgccctcgaagaaatcaagactcatatc
aattgctccgattttatagccgtctcctctcagaaaactggggccttctcctccccctgg
cgccgcccactgcctttcgacacccctgagattgcataccggaaggccaaagatgccgcc
gagaagtttgagattctccagtttgccgtctgcccgttcagaattcaaggctccaaaatc
gttgcgtatccgtataactttcacttgttccctcgggatgagctgaatttaaatatgcca
tcatacagctttgcatgtcaaacttcatttttggagtcaatgacccgccagggtgttgat
tttaacgtgtctatatatgaaggtatatcatacttatccagagtacaggagaccaaagca
aagaacagaattagtgatcccattccaagcatcatttctttcacatcctcttcaagtcca
tcagtttctgatgcaattttcatggaaaggattaagtctagaattaaatactggagggac
tcgtgcagagattctggcaaggcagctgatgaggttttagttagttctttgagaaaaatt
atcttaggcagtgaagtctatggatcaagaccatgcattagtttagatgtttgcaatgat
ggccaagtacaactaattaacaaggttgtgaagtccttctgtggagaccttgtgccttta
gtaatcccagataggagtggaggacccaagacagtaaaagtggttttgacaagttcggag
gaggacatgactcttctcaagactgagcttcaaaatcatgaagaggaacaaaataagcaa
attcgcggcttccgagaagtcatagatgcaatgtcaaattcccacaaaccaattgtagcg
tgcaactgccttaatgattttacattcatccattccaaatttgttgctcccctccctcca
agcatggccgagtttttgtgctcgttgaagttagttttctccaacattgtagacctcaac
catttgtggaaggagataggttctcttaaaaaagcaaacaatatttcagctgcttcgaac
tatttaaatagacaattttttgtaccatttgatatggaaatccctctccaagctgaggaa
gaagaacaaaagcatcatgggtataatgttgtgaggataacaaatctttttgcaaaactt
gcttctatgctaagactctctcctgattctaatacaatgttggctcatcaatctattgaa
gacttctcaaacatcttctacccttgttctatcggccttgaggaaccaacagatgaagat
gaagtgctaatgaaaaatgtgaaaaaggtgaacacagatgatttggttttcttgtggggt
tttacaagtcaaatttctgccggagagctaaagaggcaactaagtggagcccattcagct
ctttctgcagactttgagctgcgactggtgaatagaagctgtgcaattctagttttttgg
acaccaggtttggcaaaggcattactgcaggacataggctctggagctgttgagtccata
tttctaagagaactgatgtcagaaggtcttaaagcaacaggatatgaggcatataagaga
gtctgcaacttggggatcccagaagcagatttggctgattgcttagataaggtcctggca
gaggcaactgatgacataattagaagaagagaggcatcagaaatatactggagcagtgag
gatgttattagattgaatgagctttga
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