Aristolochia californica: 137963695
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Entry
137963695 CDS
T10486
Name
(GenBank) uncharacterized protein
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
acak Aristolochia californica
Pathway
acak03015
mRNA surveillance pathway
acak03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137963695
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137963695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137963695
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137963695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
137963695
NCBI-ProteinID:
XP_068666964
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MDPMAEEQLDYGDDEYGGSQKLQYQGSGAISALADEELMGEDDEYDDLYNDVNVGEGFMQ
SLQQRSEKPVLLGSVGNGGTQGLKVDNPGVRVSVPAAPQEVNIPGVDVEGKNSNISQTGF
SNVDQKRGPYLSAKNTDDVKGSEMRAETQGSTVGYRGPAPMPPKAGVDPNQVAGKFIGGP
SSLQDSGAQSGPLGAVNRATPTMNRPVVNENINRQPLASTENGSTMLFVGELHWWTTDSE
LESVCSQYGRVKEIKFFDERASGKSKGYCQVEFYESSTAAACKEGMNGYVFNGRACVVAF
ASPQTLKQMGAAYFNKAQAQGPSQGRRTMNDGVGRRGGMNYQGGDGGRNFSKVGWGRGAP
GVLNRGQGGNGPMRGRGSGGGRGMVGTAGAVGGGAGGLYGQNLGGPALGGPPGGMMHPQG
MMGAFDPTYMGRGAGYGGFAGPAFPGMMPSFQAVNTVALQGVAPHVNPAFFGRGVSNGMG
MMGSTGMDAHTGMWTDPSMAGWGGDEHGQRTRESSYGGDDVASDLGYGEASQERGGRSNA
SREKERGSDRDWSGTSERRHRDERDSDWDRSDRDRNREEKDRYRDHHRLRDRDWDNDEEW
DRGHSSKSRSKSSVMQEDDHRSRSRDSEYGKRRRE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggctgaggagcaattagattatggcgatgatgagtatggtggaagtcaa
aaactgcaatatcaaggcagtggagcaatatctgctcttgctgatgaagagctaatgggc
gaagatgatgagtatgatgatctttacaatgatgtgaatgtgggtgagggtttcatgcag
tctttgcaacaacggagtgagaaacctgttttgctagggtctgttggaaatggtgggacc
caaggtctgaaggttgataaccctggtgttcgagtctcagttcctgctgctccacaagag
gtgaacatccctggagtggatgtggaagggaaaaattccaatattagccaaactgggttc
tctaatgtggatcagaaacggggtccatatttgtcagctaagaatacagatgatgtaaag
ggctcagagatgcgtgctgagacccaaggcagcactgtaggttatagagggccagcacca
atgcctccaaaagctggggttgatcctaatcaagttgcaggcaagtttattggtggccca
tcatctttacaagattcaggtgctcaaagtggtccactgggagcagtaaaccgtgcaact
ccaaccatgaataggccagtggttaatgaaaatataaacaggcagccgttggcctctaca
gagaatggctcaactatgctttttgttggtgaactacattggtggaccaccgattctgag
ctagaaagtgtttgttcacagtatggtagagtaaaagaaatcaagttctttgatgaaaga
gccagcggaaaatctaaaggttactgtcaagttgagttttatgaatcttccacagctgca
gcatgcaaggaaggcatgaatggttatgtatttaatggccgagcttgtgtagtggcattt
gcttccccccagactttgaagcaaatgggtgctgcttattttaataaggctcaagcacaa
ggtccatcacagggaaggagaacgatgaatgatggtgtaggacgaagaggtgggatgaat
taccagggaggagatggagggagaaatttttctaaggttggttggggccgtggtgcacca
ggggtactcaaccgtgggcaaggtgggaatgggcccatgagaggaagaggctcaggtgga
gggagaggaatggtgggaactgctggtgcagttggtggtggtgctggtggtctctatggg
caaaaccttgggggacctgcactaggaggtcctccaggtggaatgatgcacccacaggga
atgatgggtgcttttgacccaacatatatgggcagaggggctggttatgggggctttgct
ggcccagcatttccagggatgatgccttcatttcaagctgttaacacagtggcacttcag
ggagtggcgccgcatgtgaacccagctttctttggccggggagtttctaatggtatggga
atgatgggtagtactggaatggatgctcatactgggatgtggactgatccaagcatggca
ggatgggggggtgatgaacatgggcaaaggacaagggagtcaagctatggtggtgatgat
gtggcatcagaccttggttatggagaggcaagtcaagaaagaggaggaaggtccaatgct
tcccgtgaaaaggagaggggttctgaccgtgattggtctggaacatctgagaggaggcat
cgtgatgagagagactcagattgggacaggtctgatagggatcggaatcgagaggagaag
gacagatacagggatcaccatagactgagggaccgtgattgggacaatgatgaagaatgg
gacagggggcactcttccaagtctcgcagcaaatccagtgtgatgcaagaggatgatcac
aggtctcgatctcgggattcagaatatgggaaaaggcgtcgtgaataa
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