Aristolochia californica: 137963739
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Entry
137963739 CDS
T10486
Name
(GenBank) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
acak Aristolochia californica
Pathway
acak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137963739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acak03009
]
137963739
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
Pre-60S particles
RNases
137963739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RLIP76_Ral-bd
DUF4159
TPD52
XLF_CC
HIP1_clath_bdg
DUF641
DUF4247
Motif
Other DBs
NCBI-GeneID:
137963739
NCBI-ProteinID:
XP_068667020
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MDQVLNAEDRDVLVDIVKLAQKQGMEGAKGGWKGFLEAYDKKFGACLSDPQKRSTDVLVA
FLKTFTKEEDLKFFDKVITRHKNNKAIQQFTRNDPNMESPVQRLVRLTTEHPLYRIEYSF
PSHNKEWVITRLGEIPKALKTNAMVAVDCEMVLCQDGTDAVVRVCAVDHNMQVKLDRLVN
PGKAVLDYKTNITGVSKEDLEGVTCSLKDVQKELKRLLRHGTILVGHSLNNDLCALKLDH
ARVIDTSLIFKYLDFPTNRRPSLNNLCKSVLGCEVRKEGAPHNCLEDARAAMKLVLAKLA
HGFDDPLAISIKESENELSKLLLHGISVSVPVQELLKIFPDYLTVEMLPVLRVRGKKYST
FAVLKDSKEADEAYKKINGKEEKDSYGKPQKLVTIELGEGTTNFYVRKMVTEGQPEQSTS
SRKRSVEEVADSKRLKPCNSVQCDHGKEVEQLKKELRQKDEEIFNLQKILSALTRKHGL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagtcctgaatgctgaagacagggatgttcttgtcgatattgtaaagctcgcc
cagaagcaaggtatggagggtgctaaaggaggttggaagggattcttggaagcttatgat
aagaagtttggagcctgcttaagtgatccgcagaagagatctacagatgttttggttgcc
tttctcaaaacatttacaaaagaggaagatttaaaattctttgataaggtaataactcgc
cacaaaaacaacaaagcaattcaacaatttactagaaatgatccaaatatggaatctcct
gtacagaggcttgtccgattgaccactgaacaccctttgtacagaatagagtactcgttt
ccttcccacaacaaggagtgggtgattacaaggttaggtgaaatcccaaaggcactgaag
acaaatgctatggttgctgtggactgtgagatggttctctgtcaagatggcacagatgca
gtagttagagtgtgtgctgtggaccataatatgcaggtcaaacttgacagacttgtaaat
cctggtaaagctgttcttgactataaaacaaacattactggagtatctaaggaagatttg
gaaggagttacttgttctctaaaagatgtgcagaaagagctgaagcgacttctaaggcat
ggaactattttagttggccacagcttaaataatgatttatgtgcactgaagctagatcat
gcacgagtaattgatacatcattaatcttcaaatatctggattttcctactaacagaaga
ccttccttgaataatttgtgtaagtcagtgttgggttgtgaagtacggaaggaaggagcc
ccacataattgtctagaagatgcacgtgccgcaatgaagctagttcttgcaaagctggcg
catggatttgatgatcctcttgccatttcaatcaaagagtcagaaaatgagctttccaag
ttgcttcttcacggcatatcagtgtccgtaccagttcaagagttattgaaaatatttccc
gactatttaactgttgaaatgctgcctgttttaagagtacgaggtaagaagtattctacc
tttgctgttcttaaggattctaaagaggctgatgaagcatacaagaagataaatggcaaa
gaagaaaaggactcttacggaaaaccccagaagctagtgacgattgagctgggggaaggg
actactaatttctatgtccggaagatggtaaccgaaggtcaaccagagcagtctacttcc
tctaggaagagatctgttgaagaggttgcagattccaaaaggttgaagccgtgcaattca
gtgcagtgtgaccatggcaaagaggtcgaacagttgaaaaaagaattacgccaaaaggat
gaagaaatctttaatttgcagaagattctgtctgctcttaccaggaaacacgggctataa
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