Aristolochia californica: 137963864
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Entry
137963864 CDS
T10486
Name
(GenBank) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
acak Aristolochia californica
Pathway
acak03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137963864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acak03021
]
137963864
03036 Chromosome and associated proteins [BR:
acak03036
]
137963864
Transcription machinery [BR:
acak03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137963864
Chromosome and associated proteins [BR:
acak03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137963864
PBAF complex
137963864
GBAF(ncBAF) complex
137963864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DUF3654
Motif
Other DBs
NCBI-GeneID:
137963864
NCBI-ProteinID:
XP_068667182
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MAANNNNQPRNPAVPSPLGNPAMVPSTMTMNQLSHLRPPSQTQTPGTSHFQTQFQTTLQV
QAQYQAQMQAQAQALSHNQNAALASSPSLSTPGTANAKRAPQKPPARPPGTSAVNAPPPF
RTTELTPAARRKKQKLPEKQVPDRVAALLPESALYTQLVDFEARVDAALARKKIDIQESL
KNPPCIQKTLRIYVFNTYANQTRTVPEKPNSEPPSWSLKIIGRILEDAVDADAAGGIPKP
SPSYPKFSSFFKRITITLDPMLYPDNPTIIWEHARSPALHEGFEIKRKGDKEFVANIRLE
MNYVPEKFKLSPPLMEVLGIEVDTRPRIIAAIWHYVKAKKLQNPSDPSYFACDPPLRKVF
GEEKMKFSVVSQKISSHIFPPQPIHLEHRIKLLGNQPAANACYDVVVDIPFPIQREMSAF
LANTEKHKEIVACDEAICAAIKKIHEHLKRRAFFLGFSQSPVEFINALIASQSRDLKLVA
GEASRNAEKERRSDFYNQPWVEDAVIRYLNRKPAGGNDAPGST
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaataataataaccaacctagaaatccagctgttccgtctcctctaggaaat
ccagccatggtaccttcgactatgacgatgaatcagctctctcaccttcgtcctccgtct
caaacccaaacgcctggaacttctcacttccaaacccagtttcagactacactccaagtt
caagcccaataccaggcacagatgcaagcccaagcgcaggcactcagccacaaccaaaat
gccgcgctggcatcttcgccttccttatctactcctggcactgctaatgctaagcgggct
ccccagaaacctccagctagacctccaggtacctctgcagtcaatgctccacctccgttc
aggaccacagaactcactccagcagctcgcaggaaaaagcaaaaacttcctgagaagcag
gtcccagatcgggttgcagcacttttacctgaatctgctctttatactcagttggttgac
tttgaggcaagggttgatgcagctttggctaggaagaaaattgacatccaggagtcccta
aaaaaccctccttgtatccagaaaactcttcggatttatgtctttaatacatatgccaac
caaactcgaactgttccagaaaaaccaaactctgaacccccttcatggtctcttaaaata
attgggagaattttagaagatgctgtggatgcagatgcagcaggtgggataccaaaacca
agcccatcatatccaaaattctcatctttctttaaaaggataacaatcacacttgatcct
atgttgtatcctgataacccaacaatcatttgggaacatgctcgctcgccagcccttcat
gagggttttgagattaagagaaagggagataaggaatttgttgcaaatataaggctggag
atgaattatgtgcctgagaagttcaaactatctccacctttgatggaagttcttggcatt
gaggttgatacacgcccaagaatcattgctgcaatttggcattatgtgaaggcaaaaaag
ctgcaaaatcctagcgacccatcatattttgcatgtgatccacctctccggaaagttttt
ggagaagaaaaaatgaaattttctgtggtttcacagaagatctcttcccatatttttcct
ccacagcccatccatttggagcataggattaaacttttgggaaatcagccagctgcaaat
gcatgctatgatgtagtagttgatattcccttccccatacagagagaaatgtcagctttc
ttggccaatacagagaaacacaaagagattgttgcatgtgatgaagcaatctgtgctgct
attaagaagattcacgagcatcttaagagaagggcattttttcttggttttagtcagtct
cctgttgagttcattaatgcgttgattgcatcacaaagccgggatttgaaacttgttgcc
ggtgaagccagtcgaaatgcagaaaaagagcgtcgatcagacttctacaaccaaccatgg
gttgaggatgctgttattcgttatctaaaccggaagccagctggaggaaatgatgctcct
ggaagcacataa
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integrated database retrieval system
