Aristolochia californica: 137965038
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Entry
137965038 CDS
T10486
Name
(GenBank) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
acak Aristolochia californica
Pathway
acak03440
Homologous recombination
acak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137965038
03450 Non-homologous end-joining
137965038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acak03032
]
137965038
03400 DNA repair and recombination proteins [BR:
acak03400
]
137965038
DNA replication proteins [BR:
acak03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
137965038
DNA repair and recombination proteins [BR:
acak03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
137965038
BRCA1-C complex
137965038
NHEJ (non-homologous end-joining)
MRX complex
137965038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
137965038
NCBI-ProteinID:
XP_068667529
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MEDSSRKDYNDTLRVLVATDCHLGYMEKDEIRRFDSFKAFEEICSIAEEKQVDFLLLGGD
LFHENKPSRSTLVKTIEILRRHCLNDRPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAIDILSSCNLVNYFGKMVLGGSGVGQITLYPILIRKGSTSVA
LYGLGNIRDERLNRMFQTPHAVQWMRAEAQEGCDVSNWFNILVLHQNRIKSNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGN
QYRPTKIPLKTVRPFEYAEVVLKDEADLDPNDQTSVLEHLDKTVRNLIDKACKKAANKAE
LKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFTKAAKKRQSLEERIDDAERL
RPEELNQQNIEALVAESNLKMEILPVTDLDVALHEFVNKDDKLAFYSCLQYNLDETRNKL
SKESDTVRIEDEDLIFRVEKCMQERVKERAVCPKESLQFGSTSQTFQNNRSKGSDGAGVP
SFSDDEDTTQMISSSRPTNRGRKGAAGRSRSARDATEVVRPAASKRGRGRGSSGGLKQTT
LDATLRVRHSERSASHAASAAVRSIADDEGNVDSVSSDESDKNETNEVVDNSEPEESLHG
RGRKRAARGRGRGSSTPSKRGRKAEASVMMQNILSSNNDDDDDDEDDSMSNRLKKTKPRV
IRNFGSLLRKA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcatccaggaaggactacaatgacactcttagagttcttgttgccaccgat
tgccatctgggttacatggagaaagatgaaatccggcgattcgattcttttaaggcattt
gaggagatatgttctatagcggaggaaaaacaggttgacttcttgcttcttggtggtgac
ctctttcatgagaataagccttcaaggtcgacattggtaaagaccatcgagatcctccgc
cgccactgcctcaatgatcggccagtgcagttccaagtagtcagcgatcaaactgtcaat
tttgcaaacagatttggacacgtaaactatgaagatcctcacttcaatgttggcttgcca
gtgttcagtattcatggcaatcacgatgatccagctggagtggataatctttctgctatc
gatatactttcttcttgtaatcttgtgaattattttggcaaaatggttcttggaggctct
ggtgttggtcagattactctgtatccgatacttatcagaaagggttcaacctcagttgct
ctatatgggctcggtaatattcgagatgaaaggctgaacagaatgtttcagactcctcat
gctgtgcaatggatgcgggctgaagcccaagaaggttgtgatgtgtcaaactggttcaac
attcttgtacttcatcaaaacagaatcaaatcaaaccccaaaaatgcaatcaatgagcat
tttctgccacgattcctggacttcattgtttggggacatgaacatgagtgccttgttgat
ccacaggaagttccgggaatgggttttcacatcactcagcctggctcttcagttgctaca
tcattaatagatggggaagcaaagcctaagcacgttcttctgttagaaattaagggaaac
caatatcgcccaactaagataccattaaagacggtgagaccctttgaatatgctgaggtt
gtactaaaggatgaggccgatctggatcctaatgatcagacatctgttcttgagcatttg
gacaaaactgtgagaaatctgattgacaaagcttgcaagaaagctgctaataaagcagag
ctcaagcttccattaattcggataaaggtagattattctggatttatgacgataaatcct
caaaggtttggccaaaagtatgttgggaaggttgcaaatccccaggatattcttattttt
acaaaagctgcaaagaaacgccagtctcttgaagagaggattgatgatgctgaacggtta
cgtcctgaagaactgaatcaacaaaatatagaggctctggttgctgaaagtaatttgaaa
atggagatacttcctgttaccgatttggatgttgcgttacatgagtttgttaacaaagat
gacaaattagctttctactcatgcttgcagtacaatcttgatgaaactcgtaacaaactt
tctaaggaatcagatactgtgaggattgaagacgaagatttgatctttagagtggagaag
tgtatgcaggagcgtgtgaaggaaagagctgtgtgccctaaggaaagcttacagtttggg
tctacatcgcagacctttcagaataacagaagtaagggatcagacggtgctggtgttcct
tcatttagtgatgatgaagacactacgcagatgatatcaagctccaggccaacaaaccgt
ggcaggaaaggtgccgcaggaagatccaggtctgctcgtgatgctactgaagttgttagg
cctgcagcttcaaagagaggaagaggtaggggttcctctggtggtttaaagcagacaacg
ctggatgcaactttgagggtccgccattctgagaggtctgcttcacatgctgcatcagct
gctgtgcgaagcattgcagatgatgaggggaatgtggattctgtttcaagtgatgaatca
gataaaaatgaaacaaatgaagttgttgataattcggagcctgaagaaagtcttcatggt
agaggccgcaaaagagctgcacgtggaaggggtagagggtcctcaacacctagtaaacgt
ggaaggaaagcagaagcatctgtaatgatgcagaacattctcagtagcaacaatgatgat
gacgatgacgatgaggatgatagcatgtctaacagactaaagaaaacaaaacctagggtc
attcgaaattttggttcactgctgaggaaagcttga
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