Aristolochia californica: 137965544
Help
Entry
137965544 CDS
T10486
Name
(GenBank) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
acak Aristolochia californica
Pathway
acak04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137965544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acak04121
]
137965544
Ubiquitin system [BR:
acak04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137965544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
DUF7885
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
137965544
NCBI-ProteinID:
XP_068667909
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDPKRSKSLTEEEEGKHVCSFPDEVLERVLLSIKSHKDRSSVSLVCKDWYNAERWSRTHV
FIGNCYSVSPEILIRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHSWLTAFASAYPFLE
ELRLKRMTIRDDSLEFLARKFVNFRALSLVSCDGFSTEGLATIATYCRNLAELDIQENGI
EDLGGTWLNCFPDTFTALEVLNFANLSSEVNFDTLERLVGRCKSLKVLKVNKNVSLEQSQ
RLLVRAPQLIELGTGSFSQDLTLRQYAELETALNNCKKLHTLSGLWEVTSIYLPALYPAC
ANLTFLNLSYACLQSAELAKILPNCPGLRRLWVLDTVEDKGLEAVGCSCPLLEELRVFPA
DPFDQDAAFGDGGGVTEVGFVAVSHGCPKLRYTLYFCRQMTNAAVETVARNCPNFTHFRL
CIMNPCEPDYMTNQPMDEAFGAVVKICTKLQRLAVSGLLTDKTFEYIGKYAKNLETLSVA
FAGNTDRGMQHVLEGCPKLRKLEIRDCPFGNAALLSGLERYESMRSLWMSACNVTMSACR
LLAREMPRLNVEVIKEDENDGNLAEKVYVYRSIAGQRRDAPNFVLTL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaaaaggtcaaagagtttaacagaagaagaagagggaaaacatgtctgttcc
ttcccggacgaggttttggagcgagttctgctttccatcaaatctcacaaagaccggagc
tccgtttcactcgtatgcaaagactggtacaacgctgagcggtggagccgaactcacgtt
ttcatcggaaattgttactctgtctctccggaaatcctaatccgccggttccccaacatc
agaagtgttacgctgaagggaaagcctcgattttccgatttcaatctggtcccaccgaac
tggggggctgatattcattcctggctaactgccttcgcttctgcttacccttttttggag
gagcttcgactaaagagaatgacgattagggatgacagcttggagtttttggctcggaag
tttgtcaatttcagagctctgtcgctcgttagctgtgatgggttcagcactgaaggtcta
gcaaccattgctacttactgtaggaacctggccgagcttgacattcaggagaatggaatt
gaggaccttggaggcacttggctgaattgctttcctgacactttcacagctttggaagtc
cttaactttgcaaatctgagcagtgaggtaaactttgataccttggagaggcttgtgggc
aggtgcaagtctctcaaggtcctgaaagtaaacaagaatgtctctctggagcagtcacag
aggcttcttgtgcgagctcctcagttgatagagcttggaactggctcattttctcaggat
ctcactcttcggcagtatgcagagcttgagacggcattaaacaactgtaagaaactgcat
accctctcagggttatgggaagtcacgtctatatatcttccagctttgtatcctgcatgt
gcaaatctgactttcttaaatttgagttatgcatgcctgcaaagtgcagaactagctaag
atattgccaaactgccctggtcttcgacgcctttgggttctggatacagttgaagacaaa
ggattggaggccgtagggtgtagctgcccgctgctcgaagagctccgtgtcttccctgct
gacccatttgatcaagatgctgcctttggagatggcggtggggtgacagaagtggggttt
gtggcagtatctcatggctgcccaaagctccggtatactctctacttctgccggcagatg
acaaatgctgcagttgaaacagttgctagaaattgtcccaatttcacgcacttccgtctc
tgcatcatgaacccctgtgagcccgactacatgaccaaccagccgatggatgaagctttt
ggtgcagttgtaaagatctgcacaaagcttcaaagactagctgtttcagggctattaact
gacaaaacttttgagtacataggcaaatatgccaagaacctggagacgttgtccgtggct
tttgctggtaacactgatagggggatgcagcacgttctggagggttgcccaaagcttagg
aagctggagataagggattgcccatttggaaacgcagctctgctgtcggggctggagaga
tatgaatccatgagatcactctggatgtcggcctgcaatgtcactatgagtgcatgtagg
cttctggccagagagatgcccagactaaacgttgaggtgataaaggaggacgagaatgat
ggtaatctggctgagaaggtttatgtttatcgttcaattgcaggccaaagaagagatgcc
ccaaacttcgttcttaccctctga
DBGET
integrated database retrieval system
