Aristolochia californica: 137965878
Help
Entry
137965878 CDS
T10486
Name
(GenBank) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137965878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137965878
Spliceosome [BR:
acak03041
]
Complex B
Other components
Prp19-related factors
137965878
Complex C
137965878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_12
RRM_YTH1
zf-CCCH
zf-CCCH_3
zf-CCCH_4
zf-CCCH_PARP12
RRM_3
Motif
Other DBs
NCBI-GeneID:
137965878
NCBI-ProteinID:
XP_068668352
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAHRLLRDVEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARFKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALAITSHDSIPKSDVNREYFAE
EHDRRARAGLDYESSYGKARPNDTILKLQRTSPYYKRNRAHVCSFYVRGECTRGAECPYR
HEMPITGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLAPPEDESIKTLYVGGLDARIT
EQDLRDRFYAHGEIESIRLVPQRACAFVTYTTREGAEKAAEELSNKLVINGLRLKLMWGR
PQAPKPETENQDNMAGSVAHGGMLPRAVISQQQTQHPQPPGTQDQPQYYNYFNIPVPAQP
ERAYYPSMDPQRMGAVVPSQEATGGSASGSGDGKAEKQPAAPPPGQFPYPGPPHPGPSHP
GQYQQFYPQYGYMHPPPPPPPYQQYPHPYQSGGPPPPPPPAGQQQYYPPRPN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcgactattgagagatgtagaggccgatggctgggagcgttctgattttcct
ataatatgtgaatcctgtcttggggataatccctatgttcgaatgacaaaagctgattat
gataaagagtgcaaaatttgtacgagaccatttactgttttcagatggaggcctggtcga
gatgcaagatttaaaaagacagaggtgtgccaaacatgcagcaagttgaaaaatgtctgc
caagtgtgtcttcttgatcttgaatatggattgcctgttcaagttcgagatactgcttta
gctataacctcacatgattctattccaaaaagtgatgtaaacagagaatattttgctgaa
gaacatgatagaagggctagagctggcctagattatgaatcctcatacgggaaggcacga
ccaaatgacaccatcttaaagcttcaacggacatcaccatattacaaaagaaatcgtgca
catgtttgtagtttctatgttcgtggggaatgtacaagaggtgcagagtgtccatatcgt
catgaaatgcctataactggagaattatctcagcaaaatataaaagatcgttattatggg
gtcaatgatccagttgcactgaagcttctgagcaaggcaggcgaaatgccatcccttgcg
cctcctgaggatgagagtataaagactctctatgtgggtggccttgatgctagaattaca
gagcaagatctgcgtgatcgcttttacgctcatggtgagatcgagtccatacgcttagtg
ccccaacgagcttgtgcttttgttacctacacaaccagggaaggtgcagagaaagcagct
gaagaactgtcaaataaattagtgataaacggtttaagactgaagttgatgtgggggaga
cctcaggctccaaagcctgaaacagagaaccaagataacatggcaggaagtgtagctcat
ggagggatgcttcccagggctgtcatatcgcaacagcagactcaacatccccagccacca
gggactcaagaccagccacaatattacaactacttcaatattccagtaccggctcaacct
gagagggcatactacccttccatggatcctcagagaatgggtgcagttgttccatcgcag
gaagcgactggaggttctgcaagcgggtctggtgatggcaaagcagaaaagcaaccagca
gcaccaccaccaggacagtttccttatcctggtccacctcatccaggtccatctcatcca
ggtcagtaccagcagttctatccccagtatgggtacatgcatcctccaccacctccacca
ccctatcaacagtatccccatccatatcagtctggaggaccgcctccgcctccacctccg
gcaggtcagcagcaatattatcctcctcgtcccaactag
DBGET
integrated database retrieval system
