Aristolochia californica: 137966315
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Entry
137966315 CDS
T10486
Name
(GenBank) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
acak Aristolochia californica
Pathway
acak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137966315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acak03041
]
137966315
Spliceosome [BR:
acak03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137966315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
PRP4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_RFWD3
WD_LRWD1
Nbas_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
137966315
NCBI-ProteinID:
XP_068669001
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MEEEKQIAVSHTEPSETTPMDSTPVPVTIPPIPPTPVVPIQPPPTIIRPLVPPVPPPVIP
PIAPVNPISARPLAPLPIRAPHIRPPVLVSQNGDSKLESGSDREGSAGPASTAEYEISEE
SKLVRERQEKAMQELLLKRRAYALAVPTNDAAVRARLRRLGEPMTLFGEREMERRDRLRS
IMVKLDAEGQLDKLLKAHEEDEAAAGPTGEDEEEGPQYPFYTEGSKSLLEARISIANFSI
ARAASRLERARRRRDDPDEDFDAEMDLVIKQVGSFVLDCSEIGDDRPVSGCSFSNDGTLL
ATSAWSGAIKLWSMPKVAKFGTLKGHTERATDVVFSPVNNQLASASADRTAKLWNTDGTL
LKSFEGHLDRLARVGFHPSGRYLGTTSFDKTWRLWDVESGEELLLQEGHSRSVYGISFHQ
DGSLVASCGLDALARVWDLRTGRSILALEGHVKPVLGLSFSPNGYHLATGSEDNTCRIWD
LRKKKSLYIIPAHSHLISQVKYEQQEGYFLATASYDMTAKIWSARDFKPVKVLAGHEAKV
TSLDIAGDGQSIATVAHDRTIKLWSGSDSNNGQGRMDVD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaaacagattgctgtttctcatacagaaccctcagaaactacaccaatg
gactcaacaccagttcctgtgactattcctccaatccctccaactcctgttgttccaata
cagccacctcccacaatcatccgccctcttgttcccccagtcccacctcctgtcattccg
cctatagcacccgtcaacccaatttctgccaggccacttgcccctcttcctatccgagca
ccccatatccgccctcctgtccttgtttcacaaaatggggatagcaagttagagtcaggt
tccgaccgagagggttccgcaggacctgcctcaactgcagagtatgaaatctctgaagag
agcaagctagtccgtgagcgccaagagaaagcaatgcaagaactccttctcaaacgacgg
gcgtatgcacttgcagttcccactaatgatgcagctgttcgggcccgacttcgccggctt
ggagagcccatgaccctctttggggagcgagaaatggagcgacgagatcgtttgaggtca
atcatggtgaaacttgatgccgaaggacagctggataagctgttgaaagctcatgaggag
gatgaagcggctgcaggacccacgggcgaggatgaggaagagggaccccagtatccattt
tatacagaaggctcaaaatctcttttagaggctcgaatcagcattgccaatttctctatt
gcaagggctgcctcaaggcttgaaagagcaaggaggagaagagatgacccagatgaagat
tttgacgcagagatggatttggttataaaacaggttggcagttttgttcttgattgtagt
gaaattggagatgatcgacccgtttcagggtgttcattttcaaatgacgggaccttgctt
gccaccagtgcttggagtggagcaatcaaattatggagcatgccaaaagtagccaagttc
ggcacgttaaaaggtcacacagaacgcgcaactgatgtggtattttctcctgtcaataac
caattagcatctgcatctgctgaccggactgcaaaattgtggaatactgacgggaccctt
ctaaaatcatttgaaggccacttggatcggcttgctcgtgttgggtttcacccatctggc
aggtacttgggaaccactagctttgacaagacgtggaggttatgggatgttgagtctgga
gaagagttgcttcttcaagaaggacacagtaggagtgtctatgggatttcttttcaccaa
gatgggtcattagtggcatcatgtgggcttgatgcacttgctcgtgtgtgggacctacga
actggacgaagcattcttgccttggaaggccatgttaaaccggttcttggactcagtttc
tcccctaatggatatcatttagcaacaggcagtgaagataatacttgtcgcatctgggat
ctgaggaagaagaaatctttgtacataataccggcacactctcacctaatctctcaagtc
aagtatgagcaacaggagggatattttctagccactgcttcatatgatatgactgctaag
atatggtctgctcgagatttcaagcctgtgaaggtactggctggacatgaagccaaagtg
acgagcttagatattgcaggagatggacaatccattgctactgttgcacatgatcgcact
atcaagctatggtctggcagcgatagcaacaatggacaggggagaatggatgtggattga
DBGET
integrated database retrieval system
