Aristolochia californica: 137966340
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Entry
137966340 CDS
T10486
Name
(GenBank) WD repeat-containing protein PCN-like isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
acak Aristolochia californica
Pathway
acak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137966340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acak03009
]
137966340
Ribosome biogenesis [BR:
acak03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137966340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Ephrin_CRD
Motif
Other DBs
NCBI-GeneID:
137966340
NCBI-ProteinID:
XP_068669023
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MEMLEIYRNSSVEWTPSPVVALATSPDDSQVAAAREDGSLEIYLVSPGSVGWHCQLTIQG
DPNSRVSSLIWCRSKSKSKPNGKLLSSSIDGSISEWDLFSLQQKIVLVSIGVSIWKIVEE
PLLDLMDCGKLENGCENGRHKGHNYDNSESSDTSDSDDGEDNSVEVSAASSYKGSSSVAL
GCDDGCVRLYAVSDSDELVYRRSFPRASGKVLSVAWSLDATLIFSGSSDGFIRCWDAQSA
HERYRITVGQGGLGGGSEICVWSLLFLRCGTLVSGDSTGAVQFWDSHYGTLLQAQSCHKG
DVNTLATVPSQNRVYSGGSDGQVILLKLTFNSTGSGGDDSATILTKKWVIVGYVRSHTHD
VRALTMAVPVSREDALLNEKAIKVRRREKPMDFSYHKWAHTGVPMLISAGDDAKLYAYSA
KEFTKFAPHDICPAPQRVPIHLVPNTLLKGTSMILVQSTSHLDLLSIQLKKDAPPDMGNR
KAARTTLLARVKSKASRKIICSAISSSRSMFAYSDHVKPNLFDLKCNIGRKGLTISKRCL
PRNLPFAHSIVFSSDSCSLVLAGHDRKIYLVDVERAELLHTFIPRRKEDIINSPPTEPPI
TKMFCSSDGQWLAAINCFGDIYIFNLEIQRQHWFVSRLNGASVTAGGFPPKNSNVLVITT
SSNEVYVFDVEAKQLGEWSRRHTLVLPRRFQEFPGEVIGLSFPPSFSSTSVIIYSSRAMC
LIDFGMPVSKCDESDLINGQDSPSKKPAGSSANGKVKRKRKDLDQETTLHSKKNFDFMSF
RDPVLFVGHLSEDSLLIIDKPWLDVIKTLDAPVHRHIFGT
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcttgaaatttacagaaacagttccgtcgagtggaccccatctcccgtagtc
gcgctcgccacaagccccgacgattctcaagtcgccgccgctcgagaggacggctctctc
gagatctatctcgtctctcctggctccgtcggctggcactgtcaactcacgatacaaggg
gatcctaactctagagtctcctctctaatctggtgccgctctaaatcgaagagtaaaccc
aatggtaaattgctgtcttcgagcatcgatggatcgatttctgaatgggacctcttctca
ctgcagcagaagatagtgctcgtttcaattggagtctctatctggaagatagtggaggaa
cctttacttgatttaatggattgtggcaaacttgaaaatggatgtgagaatgggagacat
aaaggtcataattatgataacagtgaaagtagtgatactagtgacagtgatgatggtgaa
gataattctgttgaagtttctgctgcttccagttacaaggggagttcaagtgtggccctt
ggttgtgatgatggctgtgttcgcctatatgctgtctctgattcagatgaactagtctac
agaagatcatttcctagagctagtgggaaggtattaagtgttgcttggagtcttgatgca
acgctaatattttctgggagcagtgatgggtttataagatgctgggatgcacaatcagct
catgagcgttataggattacagttgggcaaggagggttgggtggtggatctgaaatttgt
gtgtggtcattacttttcttaaggtgtggaacccttgtgagcggagatagtaccggtgct
gttcagttctgggacagtcattatggaactctgttgcaagctcaatcttgtcataagggt
gatgtcaatactttggcaacagtaccaagtcaaaacagagtgtattctggtggttcggat
gggcaggttattttattaaagctcacttttaactcaacaggatctggtggtgatgattca
gccacaatattaacaaagaaatgggttattgttggttatgtcagatcccatactcatgac
gtgagggcgctcactatggctgtccctgttagtagagaagatgcattgctcaatgagaaa
gcaattaaggtccgtcgtcgagagaagcccatggacttcagttatcacaagtgggctcat
acgggggttcctatgcttatttcagctggtgatgatgcaaagctctatgcttattctgca
aaagaattcaccaaatttgctccacatgatatctgccctgcacctcagagagtgcccata
cacttggttcctaatactctcctaaagggaacttctatgattctagttcagtccactagc
catttagatctcctgtctattcaattgaaaaaagatgctcctcctgatatgggcaacagg
aaggctgccaggactactctactggctcgtgttaaaagtaaggcatctcggaagataata
tgtagtgcaatatcaagtagtcgatctatgtttgcttactctgatcacgtcaaacccaat
ttgttcgatttgaagtgtaatattggaaggaaagggttgaccatcagtaaaagatgtctt
ccacggaacctaccatttgcccattctattgttttctcttctgattcctgtagcttggtg
cttgctggtcatgataggaagatatatctggtggatgtggaaagagcagaactattacat
acttttattccccgtaggaaagaggatatcatcaattcaccaccaactgaacccccaata
acgaaaatgttttgtagttcagatggccagtggctggctgctattaattgctttggggat
atctacatcttcaatctggagatacaaaggcaacactggttcgtttccagattgaatggt
gcctctgttactgctggaggttttcctcctaaaaatagtaatgtacttgtcattacaaca
tcttccaacgaagtctatgtgttcgatgtggaggctaaacaactgggcgaatggtcaagg
cgtcatacacttgttcttccaaggagatttcaggagtttcctggagaggtcattggactc
tcctttcctccttcattctcttcaacttctgttatcatatatagctccagggctatgtgt
ttaatagactttgggatgcctgtatcgaagtgtgatgagtctgatttgattaatggtcaa
gattcaccttcaaagaagccagctggttcttctgcaaatgggaaagtgaagcgcaaaagg
aaggatttagatcaagaaactacattacatagtaaaaagaactttgattttatgtctttc
agagatcctgtcttgtttgttggccacctctctgaagattcattgttgataatagacaag
ccatggttagatgtaattaagactttagatgctccagtgcatagacatatctttgggacc
taa
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