Acinetobacter calcoaceticus: BUM88_01740
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Entry
BUM88_01740 CDS
T05452
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUM88_01740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acal03019
]
BUM88_01740
03016 Transfer RNA biogenesis [BR:
acal03016
]
BUM88_01740
Enzymes [BR:
acal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BUM88_01740
Messenger RNA biogenesis [BR:
acal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BUM88_01740
Transfer RNA biogenesis [BR:
acal03016
]
Prokaryotic type
tRNA degradation factors
BUM88_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH_N4BP1_2nd
S1_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AQZ80442
LinkDB
All DBs
Position
363953..366046
Genome browser
AA seq
697 aa
AA seq
DB search
MSMFNIVRKEFQYGQHTVVLETGRVARQANTVLVTMGGVTVLVAVVAQPKAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRQSEAETLISRLIDRPIRPLFPEGFYNEIQVTATVVS
SDKTMDADIAAMIGASAAMSIAAVPFRGPIAGARVGLINGEYILNPTHEQLKESDLDLVV
AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAVQAIKEFAAAAGAVESTWVAPSKN
EALLEQLKAAFEAKISEAYTIAVKQDRYAALDALYAEAVAQFVPENDETGIADEVNELFE
ELKYRTVRDNILSGKPRIDGRDTKTVRGIDVQVGVLDRAHGSALFTRGETQALVTTTLGN
TRDALMVDTLSGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA
DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFAGRMHILNEMN
KVISRARPEISAHAPTFEVININPDKIRDVIGKGGATIRAITEETKAAIDIEDNGTVRVF
GETKAAARAAIAKIQALTAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
IANVTDVLKEGQEVKVQVADVDNRGRIKLTMKDIEQA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtttaatatcgttcgtaaagaattccaatatggtcaacacactgttgtttta
gaaacaggtcgtgttgcacgtcaagcaaatacagttttagttacaatgggcggcgtaact
gttttagttgcagtagttgctcaacctaaagcaaaagcgggtcaggacttcttcccgtta
acagttaactatcaagaaaaacaatatgctgcgggtcgtatcccaggtggttatggtaaa
cgtgaaggtcgtcagtctgaagctgaaactttaatttcacgtcttattgaccgtccaatt
cgtccattgttcccagaaggtttctataacgaaatccaagtgacagcgactgttgtttct
tctgataagactatggatgctgacattgctgcaatgatcggtgcttcagctgcaatgtca
attgcagctgttccattccgtggtccaattgcaggcgcacgtgttggtttaatcaacggc
gaatacattcttaacccaacccacgaacaattgaaagaaagtgatcttgatcttgtggtt
gcgggtactgaatctgcggtactgatggttgaatctgaagcgaaagaactttcagaagac
caaatgttaggtgctgtacttttcggtcatgacgaaatgcaaattgctgttcaagcaatt
aaagaatttgctgctgctgctggtgcagttgaatcaacttgggttgctccaagcaaaaac
gaagctcttcttgagcaattaaaagcagctttcgaagctaaaatttctgaagcatatacg
attgcggttaaacaagatcgttatgcagcacttgatgcactttatgcagaagctgtagct
cagttcgttcctgaaaatgacgaaactggtattgctgacgaagtaaacgaattatttgaa
gaacttaaataccgtacagtacgtgacaacatcttgtcaggtaaaccacgtattgatggt
cgtgatactaaaactgttcgtggtatcgacgttcaagttggtgtattagaccgtgctcac
ggttctgcattatttacacgtggtgaaactcaggcgttggtaacaacaactttgggtaat
actcgtgatgcattaatggttgatacattgtcaggtacgaaaactgacaatttcatgttg
cactacaacttccctgcatactctgtaggtgaaactggccgtgaatctggtcctaagcgt
cgtgaaattggtcatggccgtttagcacgtcgtggtgttcaagcagttcttcctgctgct
gaccgcttcccgtatgttattcgtattgtatctgacattactgaatctaacggttcatct
tcaatggcttctgtatgtggtgcatcattatcacttatggatgcgggtgttccacttaaa
gcaccagttgctggtatcgcaatgggcttagtgaaagaaggtgagcgttttgcagtactt
tctgacatcttaggtgatgaagatcacttaggtgatatggactttaaagtagcaggttct
gcaaacggtattactgcacttcaaatggacatcaagattgaaggtattactgaagaaatt
atggaagttgcattaaaccaagcatttgctggtcgtatgcacatccttaacgaaatgaat
aaagtcatttcacgtgctcgtcctgaaatcagcgctcatgcaccgacatttgaagtcatt
aacatcaatccggacaagatccgtgatgttattggtaaaggcggtgcaacgattcgtgcc
attactgaagaaactaaagctgcaattgatattgaagacaatggtacagttcgtgtattt
ggtgaaactaaagctgctgctcgtgctgcgattgcaaaaattcaagcacttactgctgaa
gttgaaccaggtaagatctatgacggtaaagtaatccgtattgtagaattcggtgcgttt
gtaaacatcatgccgggtactgatggtcttcttcacatttcgcaaatttcaaatgaacgt
attgcgaacgtaactgatgttcttaaagaaggtcaggaagtgaaagtacaagttgctgat
gttgataatcgtggtcgtattaaattgactatgaaagacattgaacaagcataa
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