Acinetobacter calcoaceticus: BUM88_04255
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Entry
BUM88_04255 CDS
T05452
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acal
Acinetobacter calcoaceticus
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_04255
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BUM88_04255
Archaeal homologous recombinant proteins
BUM88_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
FtsK_SpoIIIE
Seryl_tRNA_N
ABC_tran
SMC_N
AAA_21
AAA_22
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AQZ80884
LinkDB
All DBs
Position
complement(876164..879760)
Genome browser
AA seq
1198 aa
AA seq
DB search
MKILSIRIKNLASLSDEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR
LKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPN
GKLQSVQRHLKCLTDGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARD
SERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQ
QAQENYQKLEQQKNVLDKQQQWFERKAKLELEVQTKQQQFQNQQNQHQQLAGEREQLKRL
EVFSEIRPQVFQQTQNLQTLQQLEPQIQQAQIKFNDLVQIFETGQKQYQSAEQELKQTLD
FEQQHQPALNQVRQSIQERTFIADEYKKCKEKRNVLEQKLSPLQQQQNTVQQQIEQLQQN
QAHLQQQLTQTGQYAVLDKGLSAHLHQLGQFIQNYEVIEQQLGNPTLARQKLSEAKSELE
QLTTSVGTVEQIEVKLEQQRKDKEQKLAQITQLDLIQQKVKIYHELYAELQQFTEKHSQT
SAQEQQLKTVCQLAEQDYQTAKIEREKLQHILQQQRLLHTENIEQLRANLKEGEACLVCG
STHHPYRIDDSTVSKALFDLQQQQEQQAVALEQTKFNAWQSEQQTLTQCRAELEQVQKYL
SQLKAKQANLQQDLVQQLSLNQLQIDLAQPPEQILQTLSELRQAAQIAISSFDSENLRLT
QAIKQQNQLLQHVQRSESLFNTAQQWQQQVQHIVQCLSESEQHAWQQSSSQTAKQTWSIL
DARAKQLEQQEQLAQRFEQQQQELKMLAANLEQMTKQINEIDQNLKEITLKGQQNNERAV
LLIQQMTGLSDLKPHDWLIEHDAKRQHQQTAYHSSKQRFEQTRQHFEQQKQALDQLKHQH
QHTEQHQQQINAQIQNWLNEHSDFQAQDFTALIQINSAQEQDIRNRLNQAERLLSEASSA
LKTMQEQLTDHLQTQPDIEFEKLLNLIQDNIAELKAQLEVRDQLKLKLELHQQNLAKQQQ
YAEQIQNIQQEEHRWSKISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLK
RLDQSLSLAIIDHDMDGEMRSVSSLSGGESFLTALALSLAIANMASGSMKIESLFIDEGF
GTLDASSLHMVMNALDQLQNQGRQVVLISHIQEMHERIPVQIQVKPLGAGASTIEVIG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttatctattcgtataaaaaatctggcatctctttctgacgagcactttatt
gattttgaaagtgcgcctctagctcacgcaggcttaattgccattgtgggaaaaacaggc
gcaggtaagtcgaccattttagatgcgatgtgtctggccttgtttaatcgggttcctcgc
cttaaagacagcgatggtaaattaaaagatgttgatggttcagagttactgaccaattca
cctttgactgtattacgccgcggtacagggcatggttttgctgaactttgttttattgca
caagatcaaaaacgctatttagcacgctgggaaattaaacgtgcgcgtgaaaatccgaat
ggtaaattacaaagtgtgcaacgccacttaaaatgcctgaccgatggtgtggtacttgcc
gataaagccaaagcagttgatgaaaaagttaaacaaattacccagctttcatttgaacaa
tttacccgtgctgttttacttgcccagtcagaagtcacggcgtttttgaaagcacgagac
agcgaacgcggtgaactacttgagtacctgacaaactccagcattttcgccaaaattggt
gaactagcttttcgtaaaacagcagatattgctaaacagcgtaaacagcttgaagagttt
ttaggtcatattgagattttatctgatgaagaaatcgcagcatttaccgaacaatatcag
caagctcaagagaactatcaaaaattagaacaacaaaaaaatgttttggataaacaacaa
caatggtttgaacgcaaagccaaacttgagcttgaagttcaaactaaacagcaacagttt
caaaaccagcaaaaccagcatcagcaacttgcgggtgaacgtgagcaattaaaacgactc
gaagttttctctgaaatacgcccacaggtctttcagcagactcaaaatttacaaacccta
caacaacttgaaccgcaaattcagcaagctcaaattaagtttaatgatttggttcaaatt
tttgaaactggacaaaaacaatatcaatcagcagagcaagaactcaaacaaacgctcgat
tttgagcaacagcatcaacctgctttaaatcaggttcgacagtctattcaagagcgcaca
tttattgcagatgaatataaaaagtgcaaagaaaaaagaaatgttctagagcagaaactc
agcccgttgcaacaacagcaaaacacggttcaacaacagattgagcagcttcaacaaaat
caggcacatctgcaacaacagcttactcagactgggcaatatgctgtattagataaaggc
ctttcagcacatttgcatcaactcgggcaatttattcaaaactacgaagtgattgaacaa
cagcttggaaaccctactcttgctcgtcaaaagctatcggaagctaaaagtgaacttgaa
caactgacgacttcggtggggacagttgaacagattgaggtaaaacttgagcaacagcgt
aaagataaagaacaaaagcttgctcaaattactcaactagacctcattcaacaaaaagtt
aaaatttatcatgagctatatgctgagcttcagcagttcaccgaaaaacatagccaaacc
tctgctcaagaacagcagctcaaaaccgtttgccagttagctgagcaagactaccaaaca
gcaaaaatagagcgtgaaaagttacagcacatcttgcaacagcaacgcttattacatact
gaaaatattgaacagttaagagccaatcttaaagaaggcgaagcttgtttagtctgtggc
agcacgcatcacccctaccgcatcgatgacagcacagtttccaaggccttattcgacttg
cagcaacagcaagaacaacaggcagtagcgctagagcaaactaaatttaacgcgtggcaa
agcgaacagcagacacttacccagtgtcgtgccgagctcgaacaagttcaaaaatattta
tctcaacttaaagcaaaacaagcaaatttacagcaagatcttgttcagcaattaagtctc
aaccaattgcaaattgatcttgctcaacctccagaacaaatattgcaaactcttagcgag
cttagacaagcagctcaaattgcaataagttcatttgactcagaaaacttgcgtttaacc
caagcgattaagcagcagaaccagttgcttcaacatgttcagcgtagtgaaagcttgttc
aatacggcacagcaatggcaacagcaagttcagcatattgttcagtgcttatctgagtcc
gagcagcacgcatggcagcagtcgagtagccaaacggctaaacaaacttggtcaattctc
gacgcacgtgctaaacaacttgaacaacaagaacagcttgctcagcgttttgaacagcaa
caacaagaactaaaaatgttagctgccaaccttgagcaaatgaccaaacaaattaatgag
atcgatcaaaatctcaaagagattacgctcaaggggcaacaaaataatgaaagagcggta
ttgctcattcagcaaatgacaggcctttctgaccttaagcctcatgattggttaattgag
catgatgccaaacgtcagcatcaacaaacggcttatcattcgtctaaacaacgttttgaa
cagaccagacagcacttcgagcaacaaaaacaggcactagatcaactcaagcatcaacat
caacacaccgagcaacatcaacaacagattaatgcgcaaattcaaaactggttaaacgag
cattctgattttcaggcgcaggactttacggcgctcatacagattaattcagcacaagag
caagatatccgtaaccgccttaatcaggcagaacgtctactcagtgaagcttcatctgcc
cttaagacgatgcaagagcaattgactgatcacttacaaactcaaccagatattgagttt
gaaaagctcctgaacctgattcaagacaatattgcagagcttaaagctcaactggaagtt
cgtgatcagctcaaactgaagttagagctgcaccagcaaaaccttgcgaaacagcaacaa
tatgctgaacaaattcaaaacattcagcaagaagaacatcgctggagcaaaatttcaggt
ctgattggtgatgcaaaaggcaaagagttccgtgactatgcccagcaatatcatttagat
attttagtggaacatgcgaatcagcaactggcaatgctttctcaacgttatacgttaaaa
cgtcttgaccaatctttaagtcttgccattatcgaccacgatatggacggagaaatgcgt
tcggtttcgtctttatctggcggtgaatccttcttaacagccctcgccttatctttagcc
attgccaatatggcttcaggttcaatgaaaattgaatctctgtttattgatgaagggttt
ggtactttagatgcatcttctttgcacatggtaatgaatgctttagatcaattacaaaat
cagggtcgtcaggttgttctcatctcgcacattcaagaaatgcatgaacgtattcctgta
caaattcaagtgaaaccacttggtgctggcgcaagtaccatcgaggtcattggttaa
DBGET
integrated database retrieval system
