Acinetobacter calcoaceticus: BUM88_05110
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Entry
BUM88_05110 CDS
T05452
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03030
DNA replication
acal03430
Mismatch repair
acal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BUM88_05110
03430 Mismatch repair
BUM88_05110
03440 Homologous recombination
BUM88_05110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acal03032
]
BUM88_05110
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_05110
Enzymes [BR:
acal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BUM88_05110
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BUM88_05110
DNA replication proteins [BR:
acal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BUM88_05110
RNase H
BUM88_05110
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BUM88_05110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
RVT_3
Motif
Other DBs
NCBI-ProteinID:
AQZ81035
LinkDB
All DBs
Position
complement(1059025..1060401)
Genome browser
AA seq
458 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGVAFCP
TDAHLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWHWIKGHA
GHAGNEMADELANIGADQTALQKKTVQATALQDIKKPEQDWLLDDPFGFDMAEVTEEDNI
DLEQPEEVEMIIVEEEVIEVETAEPESKQPINNIHPQIVVTEAKLQLQGPRQLILDTETT
GFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPQKPVGDSENIHGISDNFLKDKPLYAD
IADTLFDYLKGAEIIAHNATFDMNFLDMEFRRAGLPALSEVCEVTDTLALAKSKHPGQKN
SLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDIDALSQSENSLNTANKT
RVQIELPVILPSEEELNTHETWVKEFEKKHGEPCLFAK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggt
ggttggggcgcatatgtcattaccgagcagggtgaacataaattatttggcggtgaaccg
gatacaaccaataaccgcatggagctcactgctgcgattgaaggcgttgcattttgccca
accgatgctcatttaattatctggacagattcaaattatgtgaagcaagggattactgaa
tggattcatggctggaaaaagaaaaactggaaggatgtaaaaaatcctgacctttggcaa
aaattagatgccgtctgtgccggtcgaaatattgaatggcattggattaaaggccatgct
ggacatgcaggcaacgaaatggccgatgagcttgcaaatatcggagctgatcaaactgcc
ctgcaaaaaaaaacagttcaagcaactgccctgcaagatataaaaaagcctgaacaggat
tggttactcgatgacccttttgggtttgatatggcagaagtaaccgaagaagataatatt
gatcttgaacagccagaagaagttgagatgattattgtggaagaagaagttattgaagtt
gaaactgctgagccagaaagtaagcaaccaattaataatattcatcctcaaattgttgtg
accgaagccaaattacaattacaagggcctcgacaactgattcttgatacagaaaccact
ggtttctatttccaagatggtgaccgcattattgaagtcggcgccattgaaatgattaac
cgaaaactcaccggtagctcgattcatatttatattaacccgcaaaaaccagtgggcgac
tcagaaaatatccatggtatcagtgataatttcttaaaagataaaccgctctatgcagac
attgccgatacgctctttgattatctaaaaggcgcagagattattgcccacaacgcgacc
ttcgatatgaacttccttgatatggagtttagacgcgcaggccttcctgcgctttccgaa
gtatgtgaggtaacagatactttagctttagcgaaaagcaaacatcccggacaaaaaaac
tcgcttgacgcccttgtaagacgttatgaaattccagcacgtgaccgtactttccacggt
gcattactcgatgctgaaattctttcagatgtttacctagcaatgacaggtggacaggtt
tcttttgatatagatgccttatctcaaagtgaaaatagcctgaacacagcaaataaaacc
agagttcaaattgaactaccagttattcttccttccgaagaagagctaaatacacatgag
acttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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