Acinetobacter calcoaceticus: BUM88_13225
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Entry
BUM88_13225 CDS
T05452
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
acal
Acinetobacter calcoaceticus
Pathway
acal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BUM88_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acal03400
]
BUM88_13225
DNA repair and recombination proteins [BR:
acal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BUM88_13225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
QSregVF_b
RNase_T
DNA_pol_A_exo1
ExoX-like_C
Peptidase_M42
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AQZ82496
LinkDB
All DBs
Position
2723844..2724530
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AA seq
228 aa
AA seq
DB search
MQAIILDTETHTLNGLPIEIAYAPIELNEGKLTLDKSKLFDQLYQVDAPISYAAMAVHHI
LETDLENQPHYKTFKLPETTTYIIGHNIDYDIAAIARCGVDVSNIKPICTLALARKVWAD
AEAHNISALIYMISQGSSKAREMLKGAHRADADIILTANILMHIVYHLNIQDIEELYRIS
EEARIPTTVNFGKHKGTAIAELPKDYIQWLLRQDELDVYLRKALESAF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccattattttagatacagaaactcatacactaaatggtttgcctattgaaatt
gcatatgctccgatcgaacttaatgaaggtaaactcaccttagataaaagcaaattgttt
gatcagttatatcaagtggatgcgcctatctcttacgctgcgatggcagtacaccacata
ttagaaacagatttagaaaaccagcctcactataaaacctttaaattgccagagactaca
acttatattattggccacaatattgattacgatattgccgcgattgctcgttgtggtgtt
gatgtatcaaatattaaaccgatttgtactttggctttagcacgtaaagtttgggcagat
gcagaagctcataatatctcagcactcatctatatgatttctcaaggcagcagcaaagct
cgggaaatgcttaaaggtgctcaccgtgccgatgccgatattattttgactgctaatatt
ttgatgcatattgtctatcatttaaatattcaagatattgaagagctctaccgaatttct
gaagaagcacgtatccctactactgttaactttggtaagcataaaggcacagcaattgct
gaacttcctaaagactatattcaatggctattacgccaagatgagcttgatgtctatctt
cgcaaagcattagaaagtgccttttaa
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