Acaryochloris sp. 'Moss Beach': HRE53_00460
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Entry
HRE53_00460 CDS
T09726
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acam
Acaryochloris sp. 'Moss Beach'
Pathway
acam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRE53_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acam03019
]
HRE53_00460
03009 Ribosome biogenesis [BR:
acam03009
]
HRE53_00460
Enzymes [BR:
acam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRE53_00460
Messenger RNA biogenesis [BR:
acam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HRE53_00460
Ribosome biogenesis [BR:
acam03009
]
Prokaryotic type
rRNA helicases
HRE53_00460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
CMS1
ResIII
AAA_22
Transketolase_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UJB69739
LinkDB
All DBs
Position
103621..105345
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AA seq
574 aa
AA seq
DB search
MSQPTLSRFADLEIAPPLLQAVEEVGYESPSPIQAQSIPPLLAGRDLLGQAQTGTGKTAA
FALPLLSRLDLSKTHPQILVLAPTRELAIQVAEAMQTYARHLPGFHIATLYGGQNISTQL
RQLRRGVHAVVGTPGRLIDHLLRGTLKLDNLSTIVLDEADEMLRMGFIEDVEKILDATPK
GRQVALFSATMPSAIRRVAQRHLKDPVEIQIKSKTATVSTVTQRYWQVRGLSKLDALTRI
LEVEDFEAMLVFVRTKVMAAELAEKLEARGYSSAVLSGDISQPLREKTIERIKAGRLDII
VATDVAARGLDVERISHVINYDIPYDTETYVHRIGRTGRAGRQGDAILFVSSREKRMLRS
IEQATRQPIQPMQIPSHADIADRRIVQFKQLITDTIEDQDLGFFEDLISNYQQEQDLNLR
EIAASLAYLVQKDKPLVPPKEDLSSDAGHAVQTSNWAADLGKPSHQQMQLFRIEVGRQHE
VKPKNIVGAIANEVNLAPRYIGQIKLFDTFSTVYLPECMPKSVFQHLKQVRVRGQKLNIS
LCDNEERSRNRSAKPSHKGRNKKHSHRKAKAGKS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacctaccctttctcggtttgccgatcttgagatcgcaccaccgttgctgcaa
gccgttgaagaagtcggctatgagtccccttctccgattcaagcccagagtattccacct
ttattagcaggccgtgatttactaggccaagcccaaacaggaacgggcaaaacggcagcc
tttgctttacccctgctgagccgactggatctatccaaaacccatcctcaaatcttagtt
ttagcgcctacccgagaattagcgattcaggtggcagaagcaatgcagacctatgctcgc
catcttcctggctttcatatcgccaccctgtacggtggacaaaatatcagcacccagctc
cgacaactccgtcgcggggttcatgcagttgtgggaacacccggacgactgatcgatcac
ctcctgcgaggcacactcaaactagacaacctctcaactattgttctagatgaagccgac
gaaatgctgcgcatgggctttatcgaagatgttgagaaaatcctagacgcaacaccgaaa
gggcggcaggtcgctctattctccgccacgatgccctctgcgattcgacgagtggctcag
cgacatctcaaggatcccgtcgagattcaaatcaagtcgaaaactgccaccgtttcgacg
gtaacccaacgctattggcaagttcgaggcctcagcaaactcgatgccctaacccgcatc
ttagaagttgaagactttgaagcaatgctggtcttcgttcgcaccaaagttatggcagcc
gaattggctgagaaactagaggctagaggttactccagtgcggtcctcagcggcgatatt
agccagcctttacgggaaaaaactattgaacggatcaaggccggtcgtttagacatcatc
gtggccacggacgttgctgcccgagggttggatgtcgaacggattagccatgtgattaat
tacgacattccctacgatacagaaacctatgtccatcgcattggtcgaacagggagagcg
ggaagacaaggggatgccatcctatttgtgtcttctcgggaaaagcggatgctgcggtct
attgagcaggccacccgccagcctattcagccgatgcaaatccctagtcatgcagatatc
gccgatcgtcggattgttcaattcaagcagttgattactgacaccatcgaagatcaggat
ctaggtttctttgaagatctgatctccaattatcagcaggagcaggacttgaacttgcga
gaaatcgctgcctccctagcttatttagtgcaaaaagataagcccttggtcccccccaaa
gaagatttatcgtcagatgcgggtcatgccgttcaaaccagtaactgggccgcagatttg
ggtaaaccctcccatcaacagatgcagctattccgcattgaggtgggccgccaacatgag
gtgaagccgaagaatatcgtgggtgcgatcgcaaatgaagttaacctcgctcctcgctat
atcggtcaaatcaaattgtttgataccttcagtacggtatatctaccagagtgcatgcca
aaatctgtttttcaacatctgaaacaggtcagagtccgggggcagaagctgaatattagt
ttgtgcgataacgaagaacggtctagaaatcgctcagctaaaccctcccacaagggtcga
aataagaagcattcccaccgtaaagcaaaggccgggaaaagctaa
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