Acaryochloris sp. 'Moss Beach': HRE53_04700
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Entry
HRE53_04700 CDS
T09726
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acam
Acaryochloris sp. 'Moss Beach'
Pathway
acam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HRE53_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acam03021
]
HRE53_04700
03400 DNA repair and recombination proteins [BR:
acam03400
]
HRE53_04700
Enzymes [BR:
acam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HRE53_04700
Transcription machinery [BR:
acam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HRE53_04700
DNA repair and recombination proteins [BR:
acam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HRE53_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UJB70413
LinkDB
All DBs
Position
complement(1042460..1043401)
Genome browser
AA seq
313 aa
AA seq
DB search
MAQFQVECLETTVEEDFSQYSRFILEPLDRGQGTTVGNALRRVLLANLRGTAVTAVRIAG
VNHEFATIPGVREDVLDILLNMKQVVLRSHTNDPQIGRLFVQGPATVTTDDFELPTEVEI
VNPTQYVATLSSDATLEMEFRIEQGKGYHAVGKNRDEAAALDFLEIDAIYMPVRRVNYEV
EDARVGGALEKDRLILDIWTNGNLTPQESLSQAATILVDLFNPLKDATFNVVEDIELEEE
DETNQIPIEGLNLSVRAYNCLKRAQINSVADLLEYSQEDLLEIKNFGAKSADEVIAALQD
HLGITMPTEKSKS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaatttcaggttgaatgtctggaaactacagttgaagaggattttagccagtat
agcaggtttattctggagcccttggatcgagggcaaggcacgacagttggaaatgctctt
agacgggttttactcgcaaatctgagaggaactgcggtcacagctgttcgtattgctggc
gtgaaccatgaatttgcaaccatccctggggtgcgtgaggatgtcctcgacattctgcta
aacatgaagcaggttgtccttaggagccatactaacgatcctcagattggccgcttattt
gttcaaggtccagcgactgtaacgaccgatgactttgagttacccactgaagttgagatt
gtgaatccaactcagtatgtagccactctatcttcggatgccaccttagagatggagttt
agaatcgagcagggtaagggataccatgcggtgggtaagaaccgagatgaagccgcagcc
ctcgactttctcgagattgatgcgatttacatgcctgttcgtcgggtcaactatgaagta
gaagatgctcgggtcggtggagccttagaaaaggatcgactgattctggatatctggact
aatggcaatctaacgccccaggaatctttaagtcaggcagctactatcttggttgatctg
ttcaatcctctcaaagatgccacctttaatgtggttgaggatattgaactggaggaagag
gatgagaccaatcaaattccgattgaaggtctaaatctttctgtccgggcctacaactgc
ctcaagcgggctcaaattaatagtgttgccgatcttctggagtattcccaagaagatctc
ctagaaatcaagaactttggagctaagtctgcagatgaagtaatcgcagctctccaagat
catctgggtatcactatgccgactgaaaaatcgaaaagttaa
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