Acaryochloris sp. 'Moss Beach': HRE53_06405
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Entry
HRE53_06405 CDS
T09726
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acam
Acaryochloris sp. 'Moss Beach'
Pathway
acam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRE53_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acam03019
]
HRE53_06405
03009 Ribosome biogenesis [BR:
acam03009
]
HRE53_06405
Enzymes [BR:
acam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRE53_06405
Messenger RNA biogenesis [BR:
acam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HRE53_06405
Ribosome biogenesis [BR:
acam03009
]
Prokaryotic type
rRNA helicases
HRE53_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UJB70693
LinkDB
All DBs
Position
1427540..1428934
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AA seq
464 aa
AA seq
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MTLTFSQLGLSQTRVDCLEALGFSTPTQIQAEAIPHLLAGRDIIGQAQTGTGKTAAFSLP
ILEQLDPTIKAPQALILTPTRELAVQVSEAVYQFKADGALRVVAIYGGQSIDRQISQLRR
GAQLIVGTPGRVLDLLSRGEIVLDQLSWFVLDEADEMLNMGFIPDVRKILERVPSNRKTA
FFSATMAPEIYKLSKQFLNDPVTVTVEQPKAAPTRINQVAYRIPRTWARSTVLQAVLELE
DPESAIIFVRTRREAATLTQQLQTAGYSADEYHGDLSQSQRERLLDRFRQRRIRWVVATD
IAARGLHVDDLSHVINYEPPDSVESYVHRIGRTGRAGNEGTAISLVHALDRWKLHEIEKH
IRQDIPTLPTPTRSAIEGRRLEKLTEELHSILTGERLASFLPTVSQLSEDYDTQTIAAAA
LQMAFDRYPAITANLDDWSSKNGGRSRKSKPVINKRRSSISAST
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacccttacgtttagtcaacttggtctttcacaaactcgtgttgattgtttagaagcg
cttggtttttccacacccacccaaattcaagcagaagctattccccatctgctggccggt
cgcgacatcattggccaagcccaaactggaactggtaaaacagccgccttctctctccct
atcctagagcagctggatcccaccataaaagcacctcaagctctgattttgaccccgaca
agggagttagccgttcaagttagcgaagccgtttaccaattcaaagcagatggtgcactg
cgagtcgtcgctatctacggtggccagtccattgaccgacaaatctcacaactgcgtcgt
ggtgctcagctgattgtcggtacccctggtcgagttttagacttacttagccgtggtgaa
atcgttctggaccaactcagctggttcgtcttagacgaagcggacgaaatgctcaatatg
ggctttattcccgatgtcagaaaaattctggagcgagtgcctagtaatcgcaaaacagca
tttttctccgccacaatggccccagagatttacaagctctcgaagcagttcctaaatgat
cccgtcaccgttaccgttgagcaaccgaaggctgcaccgacccggattaaccaggtggct
tatcgaattcctcgcacatgggcgcgatcaacggtcttacaagctgttctggaactagaa
gatcctgaatcagccattattttcgtccgcacccgccgggaagccgcaaccctaacccaa
cagctgcaaactgcaggctacagtgccgatgaatatcatggtgacttaagccaaagtcag
cgagagcgattgctggaccggttccgtcagcgacgtatacgctgggtggttgccaccgat
attgctgcccgaggattacacgttgacgatctgagccacgtgatcaactatgagccaccc
gatagtgtagaaagttacgtgcaccggatcggtcgaaccggacgtgcaggtaatgaaggc
accgccatttccttggttcatgccctcgatcgctggaagcttcatgaaattgagaagcat
atccgtcaagacattcccacgctacccactccaacccgctcagccattgaaggacgccgg
ttagagaagctgactgaagagttgcatagtattctgactggggaacgattggcttctttc
ttgcccaccgtttcgcaactgagcgaagactacgatactcaaaccattgctgcagctgca
ctacaaatggcattcgaccgctatcctgctatcacagcgaacttggatgattggtcttct
aaaaatggaggacgtagtcggaaatcaaagcccgttattaataagcgtcggagctctatt
tccgcatctacttaa
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