Acaryochloris sp. 'Moss Beach': HRE53_14645
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Entry
HRE53_14645 CDS
T09726
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acam
Acaryochloris sp. 'Moss Beach'
Pathway
acam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HRE53_14645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acam03021
]
HRE53_14645
03400 DNA repair and recombination proteins [BR:
acam03400
]
HRE53_14645
Enzymes [BR:
acam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HRE53_14645
Transcription machinery [BR:
acam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HRE53_14645
DNA repair and recombination proteins [BR:
acam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HRE53_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
SLATT_2
Motif
Other DBs
NCBI-ProteinID:
UJB67888
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All DBs
Position
3193743..3195614
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AA seq
623 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPERIRQWGERTLPNNQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVTHVWYLKGI
PSYMATLLDMPLRDVEQIVYFNAYVVLDPGNADTLSYKQLLTEDQWIEIEDQIYSEDSQL
EGIEVGIGAEAVQRLLQDIQLETEAETLRETIGTAKGQKRAKLIKRLRVIDNFVGTGSQT
DWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIGQGLVNNIKAAKRLIQRNDPVIWDVLEE
VIEGHPVMLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSI
EAQSEARLLMLASNNILSPATGRPIVTPSQDMVLGAYYLTAENPDRQNGAGKYFAHLDDA
IMAYEQQQIDLHAYVWVRFDGSVDDGEDDVEPEVETSADGTVIQTYPSRRIRKDADGNLI
SQYIRTTPGRMIYNKTIQDSLAS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctcgaacaacgatttgactacgtcaaaattgggctagcctctccggaacgg
atccggcagtggggggagcgcaccttacccaataaccaagtggtgggtgaagtcaccaaa
ccagaaaccatcaactaccggaccttaaaaccggagatggatggtttgttctgtgagcga
atcttcggccccgccaaggattgggaatgtcactgtggcaaatataagcgagtgcggcac
cggggaatcgtgtgtgagcgatgtggtgtggaggttacagaatcgcgagtccgtcgtcat
cgcatgggctatatcaaattagctgctcctgtgacccatgtttggtacttgaaaggcatt
cctagctatatggccaccctgttagacatgcccctgcgggatgttgaacagattgtttat
ttcaatgcctatgtggttttggatccaggcaatgccgatacgctttcttataagcaacta
ttaacagaagatcagtggatcgaaattgaagatcaaatctacagcgaagattcccaactg
gaaggaattgaggtaggaattggtgctgaggctgtgcaacggttattgcaagatatccag
ctagaaacagaagcggagactttaagagaaaccattggcactgctaagggccagaaaaga
gcaaagctcattaagcgtttgcgagtgatcgacaactttgtcggcacaggctcccaaaca
gactggatggttctgagcgtcattcctgttattccaccggatttgaggccgatggtgcaa
ttggatggtggacgatttgctacatctgacctcaacgatttgtaccgccgggtgattaac
cgcaataatcggctggctcgattacaagagattttagccccagagattattgtccgtaat
gaaaaacggatgttgcaagaggcggttgatgccttgatcgacaatggccgtcggggccgc
accgtggtaggagccaataatcgtcccctgaaatctctctctgacatcattgaaggaaag
caaggccgtttccgccagaacttactgggtaagcgggttgactattccggtcgttctgtc
attgtggtgggtcccaagctgaaaatgcaccagtgcggattgccgaaagagatggcgatt
gaactctttcagccttttgttatccatcgcttgatcggccaaggcttggtgaacaatatc
aaggctgctaagcgtttgatccaacggaatgatcccgtcatttgggatgtattggaagaa
gtcatcgaggggcatccggtgatgctaaaccgggcaccgacccttcaccgattaggaatt
caagcttttgaacccatcctggtggatggtcgagcaattcagctccatcctctggtctgt
ccggcctttaacgctgactttgatggggaccaaatggctgttcacgttcccctctcgatt
gaagcccagtcggaagcccgtcttctaatgttggcatcgaataatattctgtctccagca
acaggacgtcccattgttacccctagtcaggacatggtgttgggtgcttactacctgacc
gcagagaatccggatcggcaaaacggggcgggtaagtatttcgcccatttggacgacgcc
attatggcctatgagcagcagcaaattgacttgcatgcgtacgtttgggttcgatttgat
ggttctgtcgatgacggagaggatgacgttgaacctgaagtagaaacctctgctgacggg
acggttatccaaacttacccctctcgccgaattcgtaaggatgcagacgggaacttgatt
tcgcaatatattcgcacgacccctggtcgaatgatttacaacaaaaccatccaagattca
ttggctagctaa
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