Acaryochloris sp. 'Moss Beach': HRE53_17360
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Entry
HRE53_17360 CDS
T09726
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
acam
Acaryochloris sp. 'Moss Beach'
Brite
KEGG Orthology (KO) [BR:
acam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acam03021
]
HRE53_17360
Transcription machinery [BR:
acam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HRE53_17360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
Sigma70_ECF
HTH_Crp_2
HTH_AsnC-type
HTH_24
KORA
HTH_30
HTH_8
HTH_38
HTH_23
HTH_50
DUF1492
HTH_Tnp_ISL3
HTH_11
HTH_3
Crp
LacI
AbiEi_4
HTH_10
TnsD
Fe_dep_repress
HTH_17
Synaptobrevin
Motif
Other DBs
NCBI-ProteinID:
UJB68313
LinkDB
All DBs
Position
complement(3777950..3778747)
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AA seq
265 aa
AA seq
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MAYQTSLQSQTMEMLVAYRQKPSVQLRNRLVRLNMGLVRKVAHRLAHQCAEPYEDLEQCG
FLGLITAIERFDPTQGYAFSSFAVPYIRGEILHFLRDRANTVRIPRRWQQLSRDGAKVRQ
ALTMELGRHPSDQEIADELDLSMQEWRAVKLAASNRVPLSLNARVSSGHHQQSDSMMTLG
DTLMDARCQIMQTNQEDRLELQQALDQLEDRTREMIESVFVHQLSRQEVAQRIGVSPVTV
TRRIKKGIDELVGLLQKSAAMQMEV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaaacttccttacagtcccaaacaatggagatgctggttgcttatcgccag
aaaccttctgttcagctccgaaaccgcttggtccgcttgaatatgggattagtccgcaag
gtagctcaccgcctcgctcaccaatgtgcagagccttacgaagatttagagcaatgtggt
ttcctaggattaattactgccatcgagcgatttgatcccacccaaggttatgcattcagc
tcctttgctgttccttatatcagaggcgaaattcttcacttcttacgggatcgtgccaat
actgttcgcatccctcgtcgatggcagcagctgagccgcgatggtgcaaaagttcgccag
gcattgacgatggaactcggacgtcatcccagcgatcaagaaattgccgacgaactcgat
ctgtcaatgcaggaatggcgagcggttaagttagccgcctctaatcgcgtccctctcagc
ttgaatgctcgtgtctcttccggccatcatcaacagtccgactccatgatgaccctaggg
gatactctgatggatgctcggtgccaaattatgcaaaccaaccaagaagatcggttggaa
cttcagcaagcactagatcagctagaagatcgcacccgagaaatgatcgagtcagtgttt
gtccatcaactctctcgacaagaagtggctcagcgtattggcgttagccccgttacggtt
actcgccgaattaagaaaggcattgatgagttagtcggtcttttgcaaaagtctgctgca
atgcaaatggaagtctag
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