Acanthamoeba castellanii: ACA1_018990 Help Entry ACA1_018990       CDS       T02667                                  Name (RefSeq) Subunit of DNA polymerase II   KO K10728   topoisomerase (DNA) II binding protein 1 Organism acan  Acanthamoeba castellanii Pathway acan03440   Homologous recombination Brite KEGG Orthology (KO) [BR:acan00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     ACA1_018990  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:acan03032]     ACA1_018990    03400 DNA repair and recombination proteins [BR:acan03400]     ACA1_018990 DNA replication proteins [BR:acan03032]  Eukaryotic type   DNA Replication Initiation Factors    Other initiation factors     ACA1_018990 DNA repair and recombination proteins [BR:acan03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      ACA1_018990 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PTCB-BRCT BRCT BRCT_2 RTT107_BRCT_5 LIG3_BRCT BRCT_TopB1_SLF1 Motif Other DBs NCBI-GeneID:  14926817 NCBI-ProteinID:  XP_004358311 UniProt:  L8HKJ6 LinkDB All DBs Position Unknown AA seq 1617 aa AA seqDB search MSVFAGVKFFLSNRLSMEDHRNLRKIIADQGGQIVEQPGDSKCFHVLPLFTQPDAEAELL QYQKELLPIIGPPCVVEAAERRYQLPDREAVRRSPLFARFLLGAVVCSTAISADMRSALV QRVLWMGGEWHMDFTNTVTHMLAYMPGSEKYKVAVQRGRPALVHPSWVTECWKQQALVPI DQFPVPPFTGLTMTVTGFPHDEREKMKRLCMQHGGQYSSDLNRSCTHLIVERPGSKKHQY ALLWGSVKVVHPRWLYESVEKRACLKEEDFPVLPAESQSQSSANQDAPCSSGTVDSDSQL SISMADPDEAERTRSHSTALKRPRSPAGAGAGAAHSAESKKRKRAEPPAALPVSMSTSRR HDRSGGGDDEEVKSSQQPMARRQRQPRGEIAPSVTQGASMLDPATLPPFSYSPFESPSLF KGFSFLCKGFDSAKERSEIKKLVEDHGGVVTFDNPTGASTVSPVAGTYVLYELAPHGTPG VSNQPLPTGEREPPANIVVTPQWVQRCIQDERVMDPMEMPILFTPLPHPLPLPKPPLSYL ISVTGFAGVDRENLKGLIESMGFSYTDRFTKKNTHLICKEASGDKFVKAKEWQRGAIVSA EWLTQSASKGRIQDTKRFAAAQTEDVLSVNRKFEERQRSQAKINKLNKDRSVICISDPKP PKERSSTVKSGRRRSSAATSSLSSSSSTSLAPHGAAVPSEPFLSDVTILVSKKLEQQQSV LHDLVASMGGTFAYMFDPSISHLIFEGRADTSKELRLAKGHKHIKIVSPLWLHACKRHNA KVDEIEYPHTMNPRMTLGLDFKSPSLVAVKKEKRDPDNNHHPAIPQPAAIAVVKREVKEE EEDLALAFNVDNYYSQQSHHHHHHQEERDEDLFVPPTQQPSDSASYRVPLTLQHHRPQPT AGSMTTREQTETRPSDTRDESWAVPERSRRGEENECDLDEYGDERRKERKRSRERSEEEE GEEEDEPLHRSRREGRKANQRKEEREVVVEEYDDEESTRTNYEVVVGCTPDVRQGGGTTV PGMPPYFWQAGATTTTTTTTTIKTEEPGFRDDDNGEERRENEKQQQEDVDEEDEGEEKEE KEDEEEESEGSGHSAIIQQLLQKNKASSTGQMRISPLLRMQPKTSSFMLETISRTVARSD TMLGKEYNRSLSKFSSSTMFKPPMSKDILPSQTEEEEDPAPESSERRYADEPDSQVVKYA FPLEQAAQDLLFSLAEESMDTEGGASATESASERESRKRKTGAGVEETVQAKAATDASEH QRGSETKRRRKDEPKTDEDEAPPKDPMDGKEVQQQVTESPWSSRGSGNGVTGSGPNRASG SLDRSLAGKSYIFMFTAFNSTTNKLSPTYVDTVRELGGHVLETKFFHPRCTHVVMAEPVR TEKSLAACAAGIWLLKASYLEECVEKNAFVDESRHIWTEQDTDNEVAQLMIASSRRWRAE VVKRRLELQQAGKKGEELLRVGAFAGWRVLVVHYADVKRGEGLKRLIEAGGGEVCPTSAT LPSGLTMAFFNDRPDESSDLVVALRRAKVPVLTAEYIGDFLTRYPQPPVDRYNFTSPAFA YQRRPRGATGATANSAAGSSVSLLGSGGGGGGGASAAATAASTAAGVKKLSTRTVRK NT seq 4854 nt NT seq  +upstreamnt  +downstreamnt atgtcggtgttcgcgggggtgaagttcttcctctccaatcggctgtcgatggaagaccac cgcaacctgcgcaaaatcatcgcggaccagggtgggcagattgtggagcagcccggcgat tccaaatgcttccacgttctgcccctcttcacacaacctgacgcagaggccgagctgctg cagtaccagaaagagctgctccctatcattggccctccttgtgtggtggaagccgcggag aggcgctaccaactgccggacagggaggcggtacggcggagtcccctctttgcccgcttc ctgctcggcgccgtcgtatgcagcaccgccatcagcgcagacatgcggagcgcactggtc cagcgcgtgctgtggatgggcggcgagtggcacatggacttcaccaacaccgtcacccac atgctggcctacatgccgggctcggagaagtacaaggtggccgtccagcgcggccggccg gcgctggtgcaccccagctgggtgacggagtgctggaagcagcaggcgctggtccccatc gaccagtttcccgtcccaccgttcacggggctgaccatgaccgtcaccggattcccgcac gacgagcgcgagaagatgaagcggctctgcatgcagcatggcgggcagtactcgagcgat ctcaacaggagctgcacacatctcattgtcgagcgaccgggatcaaagaaacaccagtac gcactgctatggggaagcgtcaaagtcgttcacccgcgatggctctacgagagcgtggag aagcgagcgtgcttgaaggaagaggactttccagttctgccggccgagtcccagagccag agttctgccaaccaagacgccccttgctccagcggcactgtcgattcggactcacagctc agcatctctatggctgacccggacgaggcggaacgaacgcgaagccacagcaccgccctg aagcgcccgcgctcgcctgcgggcgctggcgcgggggcggcgcactcggccgagagcaaa aagcgaaagcgagcggagccgccagcagcactgccggtctcgatgtcgacttcgaggcga cacgacaggagcgggggcggtgatgacgaggaggtcaagagctcacaacaacccatggcc aggaggcagcgccagcctagaggcgaaattgcgcccagtgtcactcaaggcgcgagcatg ttggatccggccacgctcccgcccttctcctattcgcccttcgagagcccctcgctgttc aaagggttcagcttcctgtgcaagggattcgactccgccaaagagcgaagtgaaatcaaa aagctggtggaggaccacggcggggtggtcactttcgacaacccaaccggagcgtccaca gtatcgcctgtagcgggcacatatgtgctttatgaactggctccccacggcacgcctggc gtgtccaaccaaccgttgccgaccggcgagcgcgaaccacccgccaacatcgtggtcact ccgcagtgggtccaacgatgtattcaggatgagcgggtgatggaccccatggaaatgccg atcctgttcactccgctgccccatccgctcccgctgcccaagccgccactcagctacctg atctccgtcacaggctttgcaggtgtggatcgagagaatctcaagggactgatcgagtcg atggggttttcctacaccgaccgcttcacaaagaagaacacgcacctcatctgcaaggag gcgagcggggacaagtttgtgaaagcaaaggagtggcagcgaggtgccatcgtcagcgct gaatggttgactcagtccgcgagcaagggtcggatccaggacacgaaacgcttcgccgcc gcccagacggaagacgtgctgagcgtgaacaggaaattcgaggaacgccaacggagtcag gccaagatcaacaagctcaataaggacaggagcgtgatctgcatatccgacccgaagcct cccaaggagcggtcgagcaccgtgaagtcggggagacggcggagctctgccgccacctcg tcgttgtcgtcgtcgtcatcaacttccctggccccgcacggcgcagcggtccccagcgaa cccttcctctccgacgtcaccatcctcgtctcgaagaagctcgaacagcaacaatcggtg ctgcacgacttggtggcatcgatgggcggcacatttgcgtacatgttcgacccctccatc tcccacctcatttttgagggcagagcggacacgtcgaaggagcttcggttagccaagggg cacaagcacatcaagatcgtgtccccgctgtggctgcacgcttgcaagagacacaacgcc aaggtggacgagatcgagtacccgcacacgatgaacccgaggatgacgctcgggctcgac ttcaagtcgccctcgctggtcgccgtcaagaaggagaagcgcgatcccgacaacaaccac caccccgccatcccgcagccggccgcgatcgcagtcgtcaagcgcgaggtcaaggaggag gaggaggaccttgcgctcgccttcaacgtcgacaactactactcgcagcaatctcaccac catcaccaccaccaggaggagcgggacgaggacctgtttgtgccgcccacgcagcagccg tccgactcggcctcctatcgcgttccgctcacgctgcagcaccaccggccccagcccacg gcggggtcgatgacgacacgggagcagacggagacgcggccctcggatacgcgggacgag agctgggccgtcccggaacgaagccgaaggggagaggagaacgaatgcgacctcgacgaa tacggcgacgaacggagaaaagaacgaaaacgaagccgagaacgaagtgaggaggaggaa ggagaagaggaagacgagccgttgcaccgaagtagacgagagggaaggaaggcaaatcag cggaaagaagaaagagaagtggtagtggaggagtacgacgacgaagagtcgacgagaacg aactacgaggtggtggtggggtgcacgccggacgtgcggcaaggcggagggaccaccgtg ccggggatgccgccctatttctggcaggctggagcaaccaccacgaccacaacgacgacg acgatcaaaaccgaggagccagggttcagggacgacgacaatggcgaggagcgacgagag aacgagaagcagcaacaggaagacgtggatgaagaagatgaaggagaagagaaagaagaa aaggaagatgaagaggaggagagcgaaggcagcggacactcggccatcatccagcagctc ctgcagaagaacaaggcctccagcaccgggcagatgcgtatttcgccgctgcttcgcatg cagccgaaaacttcgtccttcatgctggagaccatcagtcgaacggtcgcgcgaagcgac accatgctgggcaaggagtacaaccgttcgctcagcaaattttcttcatcgacgatgttc aagccaccgatgagcaaggacatcctgccatcgcagaccgaagaggaagaggatcctgcg ccagagtcctcagagcgacgatacgcggatgaacccgactcgcaggtggtcaagtacgcc ttcccgctcgagcaggccgcgcaagacctccttttcagccttgccgaggagtcgatggac actgagggaggggcgtcggctacggagtcggccagcgaacgagagagtcgaaagcggaag accggggcgggtgtggaggagacggtccaggccaaggcggcgacggacgcgtcggagcat cagcggggcagcgagaccaagcggcggcgcaaagacgagcccaagaccgatgaagacgag gcgccgccgaaggacccgatggacggcaaggaggtccagcagcaggtcaccgagagcccg tggagcagccgaggcagcggcaacggcgttaccggctcgggtcccaaccgcgccagcggc tccctcgatcgatcactcgcaggcaagtcttacatattcatgttcacggcgttcaattcg accacgaacaagctgtcgccgacttacgtcgacacggtgcgggaactgggcggccacgtg ttggagaccaagttcttccatccgcgctgcacgcacgtggtcatggccgaacccgtgcgc accgagaaatcccttgccgcctgcgccgctggcatttggttgttgaaggcgtcgtacttg gaggagtgcgtggaaaagaacgcgtttgtcgatgaaagccgacatatttggactgagcag gacaccgacaatgaagtcgcgcagttgatgatcgcctcgagccgcagatggcgggcggag gtggtcaagcgcaggctcgagctccagcaagccggcaaaaagggcgaggagttgcttcgc gtcggggcttttgccgggtggcgagtccttgtggtgcactatgcggacgtcaagcgcgga gagggcctcaagcgactcatcgaagccggcggtggcgaggtctgtcccacctccgccacc ctgccgtcgggcctgaccatggccttcttcaacgaccgacccgacgaatccagcgacctc gtggtggcgctccggcgagccaaggtgccggtgctgacggcggagtacatcggcgacttc ctcacccgctacccgcagccgcccgtggaccggtacaacttcacgtcgcccgccttcgcc taccagcgccgcccgcgcggagccaccggtgcaacagccaactctgccgccgggtcgtcc gtctcgctcctgggttctggcggcggcggcggcggcggcgcgtcagctgcggcaaccgcg gccagcaccgcggccggggtcaagaagctctctacgcgcaccgtcaggaagtga

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