Acanthamoeba castellanii: ACA1_031570
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Entry
ACA1_031570 CDS
T02667
Name
(RefSeq) DNA mismatch repair protein msh2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
acan
Acanthamoeba castellanii
Pathway
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACA1_031570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_031570
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ACA1_031570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
Motif
Other DBs
NCBI-GeneID:
14916633
NCBI-ProteinID:
XP_004337972
UniProt:
L8GS03
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MKGKKGKEGQGGGSAKSKAEDAFCRFYNQTFPKEDGVVRFFGQKEIFSVHGEAAKFVAQE
YFRTLAAVTFSGSQQLPTVEMKQEKYEDVVRDLILVKLKKVEVWGKTGTNWAKEKKASPG
NVRDFEELLYRNKELEDTAVSVAICFGVEGQHKMVGAAFADAILRKIGYCQFVDTIHLAN
LESLLLQIGARECILAPGGTRDEIEMKKLDGLLERCGIMKTEVKKAHFKAQDIEQDLSRL
VREDMANNLHQALEHSCAMSSLAAIIKHMELLSDEDNFRSYQLKTLDLSKYMRIDQPASR
ALNLFPSPTDTDKSFSLYGLLNKCRTAMGSRRLLQWIKQPLLNIDDIEVRQNIVEIFVED
AELRQSMQEHFRRITDIDRLIKKFQRTRITASLKDCVVLYDIYRRLPSMHATLSAYSTKN
AGLLHEQYTDELARVIDEFSDFQRLIEGCIDLDAAQNNEYQINARFDPEFTQWCKEKEQV
KQKIDTIFRAVQRELGADKRDKDSVELENSKVHEWHIVVPKKASTTKLIKSKRDWSVLED
TTKAMRSRRWTELEECIQAKQKELVLEIIKCVASYVPLVEDLSILLADLDVFVSLAHVAV
NAPAGYVRPRLTPSGTGDVILKQARHPCLELQDGVGFIANDVIMKRDDSSFQIITGPNMG
GKSTYIRSAGVIVLMAQIGSFVPCSTAVVSVVDCIMCRLGASDSQLRGVSTFMAEMQETS
SILKAATQRSLIIIDELGRGTSTYDGFGLAWAISEHIINKIGCFCFFATHFHELTALEQH
IPKVKNLHVTAQTADNKLVLLYNIKQGPSDKSFGIHIAELAGFPPSVIEVAQQKVETLEK
TAQSKGVTSGVGQKRERPTSKPGAGAASAVKRPRTEGAEEEGTRLVRQFLDDFKKLPLDS
LSPAEAMQRMKGMRERLMSHNNPFVLTLLSAQQSA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaagaagggcaaggaaggacagggcgggggctctgccaaatcgaaggcagaa
gatgcattctgccgcttctacaatcaaacattccccaaggaggacggtgtggtccgcttc
ttcggtcagaaggaaatcttcagcgtgcacggagaagcagccaagttcgtggcgcaggag
tactttcgtacccttgctgccgtgacctttagcggatcacaacagctgcccaccgtggag
atgaagcaggaaaaatacgaggacgtcgtgcgggacctcatcttggtgaagctcaagaag
gtcgaggtgtggggcaagaccggaaccaactgggccaaagagaagaaggcttcgccaggc
aacgtcagggatttcgaggagctgttgtacaggaacaaggagctcgaagacactgcagtc
agtgtggccatatgctttggtgtcgaggggcagcacaagatggttggcgccgcctttgct
gatgccattctaaggaagatcggctactgccagtttgttgacaccatccacctggccaat
ctcgagtcgcttctgcttcaaattggtgccagggagtgtatccttgcgcccggtggtacg
agggatgaaatcgagatgaagaagctggacggccttctcgaacgatgcggcatcatgaag
acggaggtcaagaaggcccacttcaaggcgcaggatattgaacaagacctgtcgcgtctt
gtgcgagaggacatggccaacaacctgcaccaagcgctcgagcactcctgcgccatgtct
tcgctcgccgccataatcaagcacatggagttgctcagcgacgaggacaacttccggagc
tatcagctgaagacgctggatctctccaagtacatgcgaatcgaccagcccgcctctcgc
gcgctcaatctgttcccttcgcccaccgacaccgacaagagcttcagtctgtacggcctg
ttgaacaaatgcaggacggcgatgggctctcggcgccttctacagtggatcaaacagccg
cttctcaacatcgacgacattgaggtgaggcagaacatagtggagatatttgtggaggat
gcggagctgcgacagtccatgcaggagcacttccgacgcatcacggacatcgaccgcctc
atcaagaagttccagcgaaccaggatcaccgcctccctcaaggactgtgttgtgttgtac
gacatctaccgtcggctcccgtccatgcacgccaccctgtcagcctacagcaccaagaac
gccggactccttcacgagcagtacaccgacgaactggccagggtgatcgacgagttctcg
gatttccagaggctgatcgagggctgcatcgatctcgacgccgcgcagaacaacgaatac
cagatcaacgccaggttcgatccggagttcacccagtggtgcaaggagaaggagcaggtc
aagcagaagattgacaccatcttccgtgcggttcaacgagaactgggggcggacaagcgg
gacaaggacagcgtcgagctcgaaaactcgaaggttcacgagtggcacatcgtcgttccg
aagaaggcgagtacgacaaagctgatcaaatccaagcgggactggagcgtgctcgaggat
acgaccaaagccatgcggagccgacggtggaccgagctggaggagtgcattcaggccaag
cagaaggagctggtgctggagatcatcaagtgcgtcgcgtcctacgtgcctttggtggag
gacctgagcatcctgctggccgacctcgatgtcttcgtgagcttggcgcatgtggcggtg
aacgcgccggcgggctacgtgcggcctcgcctcacgcccagcggcacgggcgacgtgatt
ctcaagcaggcgcggcacccctgcctcgagctgcaggatggcgtcggcttcatcgccaac
gacgtcatcatgaagcgcgacgattcgtctttccagatcatcaccggtcctaacatgggc
ggcaagtcgacctacatccgctccgcgggcgtcatcgtgctgatggcgcagatcggctcg
ttcgtgccctgctcgactgctgtggtgtccgtcgtcgactgtatcatgtgtcgcctgggc
gcttccgattcacagctacggggagtgtcgacgttcatggccgagatgcaagagacgtcg
tccatcctgaaggctgctacacagcgctcgctgatcatcatcgacgagttgggccgcggc
acgagcacctacgacggctttggcctcgcctgggccatatccgagcacatcatcaacaag
attggatgcttctgtttcttcgccacgcacttccacgagctcaccgcgctcgagcaacac
attcctaaagtcaagaatctgcacgtcacggcgcagacggcggataacaagctggtgctg
ctctacaacatcaagcaaggcccttcggacaagagcttcggcatccacatcgccgaactg
gccggcttccctcccagcgtcatcgaagtggcacagcagaaggtcgaaaccctggagaag
acggcccagagcaagggcgtcacgagcggcgtgggccagaagagagagcggcccacgagt
aagcccggtgctggggcggcctccgccgtcaagcgaccgcgaaccgagggcgcggaggag
gaaggtacgcggcttgtgcggcagttcctggacgacttcaagaagctgcccctggactcg
ctgtcgccagccgaggcgatgcagcgaatgaagggcatgcgggagcgcctgatgagccac
aacaacccgtttgtcctcacgctcctcagcgcccaacagagcgcgtaa
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