Acanthamoeba castellanii: ACA1_038280
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Entry
ACA1_038280 CDS
T02667
Name
(RefSeq) splicing factor 3b subunit 3, putative
KO
K12830
splicing factor 3B subunit 3
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_038280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acan03021
]
ACA1_038280
03041 Spliceosome [BR:
acan03041
]
ACA1_038280
03036 Chromosome and associated proteins [BR:
acan03036
]
ACA1_038280
Transcription machinery [BR:
acan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
ACA1_038280
Spliceosome [BR:
acan03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
ACA1_038280
Complex B
ACA1_038280
Complex C
U2 SnRNP specific factors
ACA1_038280
Chromosome and associated proteins [BR:
acan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
ACA1_038280
TFTC complex
ACA1_038280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
14914176
NCBI-ProteinID:
XP_004335656
UniProt:
L8GLR0
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MHIYNLTLQRATAITHAIFGNFSAPKAQEIVVARGKVLELLRPNDFNGKVQTVLSVEVFG
TIRSIVPFRLTGDTRDYIIVGSDSGRIVILQYNNERNTFDKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAVEKQKLVYILNRDSAARLTISSPLEAHKSHTINIHMVGVDVGFENP
IFATLEVDYADVDHDPTGKEFEALHKNLTFYELDLGLNHVVRKWSEPVDITANMLVAVPG
GSDGPGGVLVMGENFVVWKNQGHQEVRAALPRRKILGEERSVLIVSATAHKQKDLFFILL
QSEYGDIYKATLAWEEDNVSAIKINYFDTVPTSNAMCILKTGFLFVAAEFGNHFLFQFQS
IGDEEEESTMDQDEDEIPTFDPQPLKNLIAIDEIESLAPIMDFKVADMVKEETKQFLTLC
GRGPRSSLRLLKHGLAVAEMADSPLPGNPNNIFTVRKNVADEYDSYIIVSFLNATLVLSI
GDNVEEVKDAGFNENASTLNVGLVGDDSLVQVFPTGIRFIRSDKRITEWPTPARRTIVRS
AINNKQVVIALTGGELLYFELDITGSLVEVGRKDMGRDIACIDIAPIPEGRLRARFLAVG
DYENTVRVLSLDPEDVFSSLAVQALPAPPESLCIVKMKGGTDSSAGTLFLNIGLTNGVLQ
RTVLDKVTGELSDTRTRFLGSRPVRLLKLRVGDQPAMLALTSRAWLCYNYQLHLHLTPLS
YPALDYASNFCSERCPEGMVATIGNALRIISPERLGEVFHQELIPLRYTPRKMLVYPTTG
NLITIETDHNTYPALIQGGLRQRLLEAQQEPSAAAADGDSGAVKKEKEEEMETEDGEKTK
EAKMGKLEELQREQAEREESARVFGTEKPGVGKWASCVRLLDVNTKQTIDVVELDNNEAA
FSACTCVFHDRGGEIFLVVGTAKGLVLNPRSCDAGYIHVYRLLDGGKRFSLVHKTQVEGV
PTAVCGFQGRLLVGIGKMLRIYDLGKRKLLRKCENKGFPHCIQSITTQGERIIVGDLAES
FHFVKYRKAENQLNVYADDSNPRWLTASQMLDYDTMAGADKFGNVFIVRLPSEVNEELED
NPMGNFLMSKQSLNGAAFKLQTLINFHVGDTINSMTKASLFTGGADVLVYTTLMGGMGAL
LPFVSREDVDFFSHLEMHMRSELPPLCGRDHLAYRSYYFPVKDVIDGDLCEQFSLLPPEK
QRTIAEELDRTPGEVLKKLEVIRNSIL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgcacatctacaacctcacccttcagcgggcgaccgccatcacccacgccatctttggc
aatttttcggcgcccaaggctcaagaaatcgtggtggctaggggcaaggtgcttgagctc
ctgcgacctaacgacttcaatggaaaggtgcaaactgtgctctcggtcgaggtgttcggc
accatccgctcgatcgtgcccttccgactgactggcgacacgagggattacatcatcgtg
gggtcggattcgggacggatcgtgattttgcagtacaacaacgagaggaacaccttcgac
aagatccatcaggagacgttcggcaaatcaggctgccgacgcatcgtgcccggccaatac
cttgccgtggaccccaagggacgagcggttatgattggcgccgtggagaagcaaaagctg
gtgtatatcctcaaccgcgactctgcagcaaggctcactatctcctcgccgcttgaggcg
cacaagtcacacaccatcaacattcacatggtgggtgttgacgtgggcttcgagaacccc
atctttgccactctcgaggtcgactatgccgacgttgatcacgatcccacaggcaaggag
ttcgaggctctgcacaagaacctcaccttctacgagcttgacctcggtctcaaccacgtg
gtgaggaaatggagcgaacccgtggacatcactgccaacatgctcgtcgccgtgcctggc
ggttccgacggccccggaggcgtgctcgtgatgggcgagaactttgtggtctggaagaac
cagggccatcaggaagtgcgtgctgccctgccccgccgaaagattctgggcgaggagcga
tcagtgctgatcgtgtccgccacagcgcacaagcaaaaggacctgttctttatcctgctc
caaagcgagtacggcgatatctacaaggcgacactggcctgggaagaggacaacgtcagc
gccatcaagatcaactactttgacactgtgccgacgtcgaacgccatgtgcatcctcaag
accggtttcctctttgtggccgccgagtttggcaaccatttcttgttccagttccagtcg
atcggtgatgaggaagaagagtccacaatggaccaagacgaagacgagatccccaccttc
gacccccagccgctcaagaatttgattgccatcgatgagatcgagagccttgcgcccatc
atggacttcaaggttgccgacatggtgaaagaagagaccaagcaattcctcacactctgc
ggccgtggtcctcgatcgtcgctccgactcttgaagcacggtcttgcggtagccgagatg
gccgactcgccgcttcccggcaatcccaacaacatcttcaccgtcaggaagaacgtggct
gacgagtacgacagctacatcatcgtctccttcctgaatgccaccctcgtgctttccatc
ggcgacaacgttgaagaggtcaaagatgccggcttcaacgagaacgcgtcgacgctgaac
gtggggctcgtgggcgatgattcgctggtgcaggtgttcccgaccggcatccgcttcatc
aggagcgacaagcgcatcaccgagtggcccacgccggcccggaggacgatcgtccgttcg
gccatcaacaacaagcaggtcgtcatcgccctcaccggcggcgagctcctctatttcgag
ctggacatcacggggtcgctggttgaagtgggccgcaaggacatgggccgggacattgcc
tgcatcgacatcgctcccatccccgaaggtcgcctgcgtgctcgcttcctggctgtgggc
gactacgagaacacggtgagggttctgtcgctggaccccgaggacgtgttctcctcgctg
gccgtgcaggcgcttcccgcgccgcccgagtccctctgcatcgtgaagatgaagggcggc
accgactccagtgccggcaccctcttcctcaacatcggtctcaccaacggtgtacttcag
cgaaccgtgctggacaaggtcaccggcgagctttccgacacgcggaccaggttccttggt
tcgcgcccggtgaggctgctgaagctgcgagtcggcgaccagccggccatgctggcgctc
acgagcagggcgtggttgtgctacaactaccagctgcaccttcacctcaccccgctctcc
taccccgcgttggactacgcctccaacttctgctccgagcgttgccccgagggcatggtt
gccaccatcggaaacgccctgaggatcatctcgcctgagaggctgggtgaggtcttccac
caagagctcatcccgctgcgctacacgccccgcaagatgctggtgtacccgacgaccggc
aacctcatcaccattgagacggaccacaacacctacccggcgctcatccagggcggcttg
aggcagaggctgctggaggcccagcaggagcccagcgctgccgctgccgacggtgactcg
ggtgcggtgaagaaggagaaggaggaggaaatggagaccgaggacggagaaaagacaaag
gaggccaagatggggaagctcgaggagctgcagcgagagcaggcagagcgagaggagtcg
gcgagagtgtttggcacggaaaagccaggcgtgggcaagtgggcaagctgcgtccgtttg
ctggacgtgaacaccaagcagacgatcgacgtcgtcgagctcgacaacaacgaggctgct
ttcagcgcctgcacttgcgtcttccacgacaggggcggcgagatcttcctggttgtgggc
acggccaagggcctcgtgctcaacccgcgaagctgcgatgcaggttatattcacgtctat
cgcttgctcgatggcggcaagaggttctcgctggtccacaagacgcaggttgagggcgtt
cccacggccgtctgcggtttccagggccgtttgctcgtgggcatcggcaagatgctgcgc
atctacgatctcggtaagcgcaagctcctgaggaagtgcgagaacaagggcttcccccac
tgcatccagagcatcaccacccagggcgagcggatcattgtgggtgaccttgccgagtcg
ttccactttgtgaaataccgaaaggcggagaaccagctcaacgtctacgctgacgattcc
aacccgcgctggttgaccgccagccaaatgcttgactacgacaccatggcgggcgcagac
aagtttggcaacgtcttcatcgtgcgattgcccagcgaggtcaacgaggaattggaggac
aacccgatgggcaacttcctcatgagcaagcagtcgctgaacggtgccgccttcaagctc
cagacgctgatcaatttccatgtgggcgacacgatcaactcgatgaccaaggcctcgctc
ttcaccggcggtgccgatgtgctcgtctacaccacgctcatgggtggcatgggagcgctt
ctgcccttcgtctccagggaggatgtggacttcttctcgcatttggagatgcacatgcgc
agcgagctgcctcctctgtgcggacgggaccacctggcctaccgctcgtactacttcccc
gtgaaggacgtcattgacggcgatctgtgcgagcagttctcgctgctcccgcccgagaag
cagaggaccatcgctgaggagctcgacaggacgcccggcgaggtgctcaagaagctcgaa
gtcatccgcaacagcatcctctaa
DBGET
integrated database retrieval system
