Acanthamoeba castellanii: ACA1_048490 Help Entry ACA1_048490       CDS       T02667                                  Name (RefSeq) alphaCOP, putative   KO K05236   coatomer subunit alpha Organism acan  Acanthamoeba castellanii Brite KEGG Orthology (KO) [BR:acan00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:acan04131]     ACA1_048490   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:acan04147]     ACA1_048490 Membrane trafficking [BR:acan04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     ACA1_048490 Exosome [BR:acan04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    ACA1_048490   Exosomal proteins of bladder cancer cells    ACA1_048490 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd TPR_COPA_B EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st zf-Tbcl_FmdE Zn_ribbon_15 Motif Other DBs NCBI-GeneID:  14911447 NCBI-ProteinID:  XP_004333061 UniProt:  L8GEB3 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MLTKLETKSNRVKGLSFHPKRPWILASLHNGLIQLWDYRIRTLLDRFDEHDGPVRGISFH ATQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHMDYIRTVQFHHEYPWILSASDDQTIRIW NWQSRTCIAVLTGHNHYVMSAYFHPKEDLVVSASLDQTVRIWDISGLKKKNVSPTGGLDD PLRLAQNDLFGNPNVVVKYVLEGHDRGVNWAAFHPSLPLIVSGADDRSVKLWRMNDTKAW EVDTLRGHYNNVSCVIFHPHQELILSNSEDKTIRVWDMSKRSAVQTFRREHDRFWIIAAH PENNLFAAGHDSGLIVFKLERERPAYVAHKGALFYVKERYLRTYDFASARDVPVMSIRRA VAKSPRSLSYNPAEKAVLLYSDADGGTYEFYKLPADGRSADSVESKKGAANSAVFIKRNR FAALDAKAGQLHLKNLKCETVKRLPMPPGTDMIFAAGLGSLLLRAEDKIILYDLQQKRAV AELTAPNIKYVIWDDKGAHVALLGKDTLVLATRKLEQECIIHETMRIKSGAWEESGVFLY TTVSHMKYCLRDGEHGIVRTLDVPIYVTGVRGNQVHCLDREGRNRVVLIDPTEYAFKMAL AHRRYADVLKMVKPGQSNLVGQAIIAYLQRKGYPEVALYFVKDDKTKFNLALECGNIEVA QACAKALDDKDAWHRLGTEALRQGNHQVVEMAYQRTKNFERLSFLYLITGNVEKLHKMLK IAEMRNDTMGRFHNALYLGDVHERVRILEEVGQFGLAYTTAATHGLAEDAARLAEKLDGN LAPVPEESATRLMVPPAPILRHHDSNWPLLTVSPGFFDPSTMDDSSGRGIRAAAPGLDLD DEGEEAAGAWDDTGADLGEEGEGEGLAPAADLGNDEDDGGAGWDDDGGLDGLDSVDLVPA KSESFFVAPRPGQNARQVWTKNSRHAADHAAAGSIESAMELLHQQVGVVNFAPLRPHFMA LWMGAHAASPSGPLGPAVISNLERIVEGQSAGLPALWTNVGLLIEQLKAAYRSTTKGAFG EALDTFASLLHMLVFVVAPTRQARTEVEELRDLCREYILGLRMELHKKTLPAQNQIEALE LAAYFTHCNLQPIHRMLALRSAMKAAYRIKCYHLAASFASRLLELSPKPEIAQEAKKVIK FAETNNTDAHTLNYDERNPFVVCGISFTPIYKNRPSIECPYCHTHYLPAHAGKLCPTCQL SEIGKETSGIKFTPGRD NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgctaacaaagctcgaaacgaagagcaatcgagtgaagggcttgagctttcaccccaag aggccctggattcttgcctccctccataatggcctcattcaattgtgggattaccgcatc agaactcttttggatcgattcgatgagcatgatggccccgtgaggggaatcagcttccac gctacacagcctctcttcgtgtcaggcggcgatgactacaagatcaaggtgtggaactac aagctgcggcgctgtctcttcactctgctcgggcacatggactacatccgcacagtccaa ttccaccatgaatacccctggattctgagcgcgtccgacgatcagacgatcagaatctgg aattggcagtcccgtacctgcatcgccgtactcactggccacaaccactacgttatgagc gcctacttccaccccaaggaggatctcgtcgtctccgcctcgcttgatcagactgttcgc atctgggacatttctggtctgaagaagaagaacgtttcgcccacgggaggacttgacgac ccgctccgtctcgcacagaacgatcttttcggcaaccccaacgtggtggtcaagtacgtg ctcgagggccacgacaggggcgttaactgggccgccttccacccctctctgcccctcatc gtttcgggcgccgatgatcgctcggtcaagctctggcgaatgaacgacacgaaggcgtgg gaggtggacacgctgcgcgggcactacaacaacgtgtcgtgcgtgatcttccatccgcac caggagctcatcctgagtaactcggaggacaagaccatccgcgtgtgggacatgtccaag cgctcggcggtgcagaccttccgcagggagcacgaccgcttctggatcatcgcagcgcac cccgagaacaacctcttcgccgcgggtcacgattcgggcttgatcgtgttcaagctcgag cgggaacggcccgcctacgtagcgcacaagggggcgctgttctacgtcaaggagcgctat ctgcgcacctacgatttcgcctcggcccgcgacgtgcccgtcatgtccattcggcgcgcg gtggccaagtcgcctcgctcgctctcctacaaccccgccgagaaggccgtcctcctctac tcggacgccgacggtggcacgtacgagttctacaagctccccgccgacggacgctcggcc gactcggtcgagtccaagaagggcgccgccaactcggccgtcttcatcaagcgcaaccgc ttcgccgccctcgacgccaaggccggccagctgcacctcaagaacctcaagtgcgagacc gtcaagcgcctgcccatgcccccgggcaccgacatgatcttcgccgccggcctcggctcc ctcctcctccgcgccgaggacaagatcatcctctacgacctccagcagaagcgcgctgtc gccgagctcaccgcgcccaacatcaagtacgtcatctgggacgacaagggcgcccacgtc gccctcctcggcaaggacacgctcgtgctcgccacccgcaagctcgagcaggagtgcatc atccacgagaccatgcgcatcaagagcggtgcctgggaggagagcggcgtcttcctctac accaccgtgtcccacatgaagtactgcctccgcgacggcgagcacggcatcgtgcgcacc ctcgacgtgcccatctacgtgaccggcgtccgtggcaaccaggtgcactgcctggaccgc gagggccgtaatcgcgtggtgctgatcgacccgacggagtacgccttcaagatggcgctg gcgcacaggcggtacgccgacgtgctcaagatggtgaagccgggccagtcgaacctggtg ggccaggccatcatcgcctacctgcagcgcaagggctaccccgaggtggcgctctacttt gtcaaggacgacaagaccaagttcaacctggccctggagtgcggcaacatcgaggtggcg caggcgtgcgccaaggcgctcgacgacaaggacgcctggcaccgactgggcaccgaggcc ctgcgccagggcaaccaccaggtggtcgagatggcctaccagcgcaccaagaactttgag cggctctccttcctctacctcatcacgggcaacgtggagaagctacacaagatgctcaag atcgccgagatgcgcaacgacaccatgggccgcttccacaacgccctctacctgggcgac gtccacgagcgcgtgcgcatcctcgaggaggtcggccagttcggcctcgcctacaccacc gccgccacgcacggcctcgccgaggacgccgctcgcctcgccgagaagctcgacggcaac ctggcccccgtgcccgaggagtcggccacgcgcctgatggtgccccccgcgccgatcctc cgccaccacgactccaactggcccctgctcaccgtctcgccgggcttcttcgacccctcg accatggacgactcctccggccgcggtatccgcgctgccgcccccggcctcgacctcgac gacgagggcgaagaggccgccggcgcctgggacgacaccggcgccgacctcggcgaggag ggcgaaggtgagggcctcgctcccgccgccgacctcggcaacgacgaggacgacggcggt gccggctgggacgacgacggcggcctcgacggcctcgacagcgtggacctggtcccggcc aagtccgagtcgttctttgtcgcgccgcgaccgggccagaacgcgcgccaggtgtggacc aagaactcgcgccacgccgccgaccacgcggcggccgggtccatcgagagcgccatggag ctgctccaccagcaggtgggcgtcgtcaactttgcgccgctgcgcccgcacttcatggcc ctctggatgggcgcccacgccgccagcccgagcggacccctcgggcctgcggtgatctcc aacctggagcgcatcgtcgagggccagagcgccggcctgccggccctgtggaccaacgtg ggcctgctcatcgagcagctcaaggccgcctaccgctcgaccaccaagggcgccttcggc gaggccctcgacaccttcgcgtcgctgctgcacatgctggtcttcgtcgtcgccccgacc aggcaggcgcggacggaggtcgaggagctgcgcgacctgtgccgcgagtacatcctgggc ctgcgcatggagctgcacaagaagaccctgcccgcccagaaccagatcgaggcgctggag ctggcggcctacttcacgcactgcaacctgcagcccatccaccgcatgctcgccctgcgc tcggcgatgaaggccgcctaccgcatcaagtgctaccacctcgccgcctcgttcgcctcc cgcctgctcgagctctcgcccaagccggagatcgcgcaggaggccaagaaggtgatcaag ttcgccgagaccaacaacaccgacgcccacaccctcaactacgacgagcgcaaccccttc gtcgtgtgcggcatctccttcacgcccatctacaagaaccgcccctccatcgagtgcccc tactgccacacccactacctccccgcccacgccggcaagctctgccccacctgccagctc tccgaaatcggcaaggagacctccggcatcaagttcacgccaggcagagactaa

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