Acanthamoeba castellanii: ACA1_050620
Help
Entry
ACA1_050620 CDS
T02667
Name
(RefSeq) TFIIH basal transcription factor complex subunit 2, putative
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
acan
Acanthamoeba castellanii
Pathway
acan03022
Basal transcription factors
acan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACA1_050620
09124 Replication and repair
03420 Nucleotide excision repair
ACA1_050620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acan03021
]
ACA1_050620
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_050620
Transcription machinery [BR:
acan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACA1_050620
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACA1_050620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
SinI
Motif
Other DBs
NCBI-GeneID:
14913016
NCBI-ProteinID:
XP_004334515
UniProt:
L8GHP6
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MGSTVIQPPSDRVVSLLTRGEFMVVHEEDQSIRIADKGFPFLLKDLRTQVWILLLLYLRS
LQEEKANVHDVLSFLFRLSFLTVGEGYQMDDLAFSESGLLQDLQDLGIIYRKHRDSKWLY
PTQLAIGLSSTEAAKRDQEGWIIVGTDYRIYAYTSSPVKLLLLSLFTQIEYQLPNMVMGI
LLRENIRQAVQVGISANQILQFLETNAHPQMKQNTPIIPESIADQLRLWEAEDRRLSLSP
GYFYDDFASLAAFKKAEKYARDVGALLYSDAAKRFLFVTEQGHQLLRRYVKQHLSSSSSS
LTPK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaccgtcatccaaccgccgtccgaccgagtcgtgtctctcctgacccgcggg
gagttcatggtggtacacgaggaggaccagtcgattcgcatcgcagacaagggcttcccg
ttcctgctgaaggacctgcgcacgcaggtctggatcctgctgctcctctacctgcggtcc
ctgcaggaggagaaggccaacgtccacgacgttctctccttcctcttccgcctcagcttt
ctcaccgtcggcgagggctaccaaatggacgaccttgcgttctccgagtccgggctgctc
caggacctgcaggacctgggcatcatctatcgcaagcacagggactcgaaatggctctac
ccgacgcaactggccatcggcctctcgtcaaccgaagcggcgaagcgggaccaagagggt
tggatcatcgtcggcaccgactaccgcatctacgcctacacctccagccccgtgaagctg
ctcctgctgagcctgttcacccagatcgagtaccagctgcccaacatggtcatgggcatc
ctgcttcgcgaaaacatccgacaggccgtgcaggtcggcatctccgccaatcagatcctg
cagtttctcgagacgaacgcgcatccacagatgaagcagaacacgcccatcattccagag
tcgatagccgaccagctgcgattatgggaagccgaggaccgacgcctgtccctcagcccg
ggctacttctacgacgatttcgcttcgctggcggcgttcaagaaggcggaaaagtacgcc
cgggacgtgggcgctctcctttactcggacgccgccaagcgattcctttttgtgaccgag
cagggacaccaactgctgcgacggtacgtcaagcagcacctctcctcctcctcttcctca
ttgacacccaaatga
DBGET
integrated database retrieval system
