Acanthamoeba castellanii: ACA1_054320
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Entry
ACA1_054320 CDS
T02667
Name
(RefSeq) PremRNA processing splicing factor 8, putative
KO
K12856
pre-mRNA-processing factor 8
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_054320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_054320
Spliceosome [BR:
acan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ACA1_054320
Complex C
U5 SnRNP specific factors
ACA1_054320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
JAB
Motif
Other DBs
NCBI-GeneID:
14921556
NCBI-ProteinID:
XP_004344089
UniProt:
L8H8A6
LinkDB
All DBs
Position
Unknown
AA seq
2339 aa
AA seq
DB search
MADTETVHMHDAPSAADKALEEKSRKWHQLNSKRYGEKRKFGHVEPQKEDMPPEHIRKII
KDHGDMSSKKFRHDKRVYLGALKYVPHAILKLLENMPMPWEQVRDVPVLYHITGAITFVN
QIPLVVEPIYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNIMDVEPLDP
IQMEFEEIEDAPVKDWLYDNRPLADTKYINGPSYKSWRLPLPIMANLYRLASQLLSDLND
KNYFYLFDTKSFFTAKALNMAIPGGPKFEPMYRDIDEADEDWNEFNDINKLIIRHQLRTE
YKVAFPYLYNNRPRSVHITPYHHPLSVYIKTDDPDLPAFYFDPLINPIASWRGEKGRGGD
GDDDEFDDDEEAPFALPEGVEPLLKDTDLFTDNTASGIALYWAPRPFNLRSGRTRRAQDV
PLVKSWYMEHCPQNHPVKVRVSYQKLLKCYVLNQLKHRPPKALNKRYLFRSLAATKFFQS
TELDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAF
HLCREILRLTKLVVDANVHFRLGHVDAFQLADGLQYIFAHVGQLTGMYRYKYRLMRQIRM
CKDLKHLIYYRFNTGPVGKGPGCGVWAPAWRVWLFFLRGVVPLLERWLGNLLARQFEGRH
SKGIAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIRANKSRTILQHLSEAWRCWKANI
PWKVPGLPAPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCKKNLGRLTRLWL
KAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRKFSPIPFPPLNYKHDTKLLILSLE
HLKEAYSVKSRLNQSQREELGLVEQAYDNPHEALSRIKRHLLTQRAFKELGIEFMDLYSY
LIPVYDIEPLEKITDAYLDQYVWYEADKRHLFPNWIKPADTEPPPLLTYKWCQGINNLTN
VWDTSEGECVVLMETKLEKVYEKIDLTLLNRLLRLILDHNIADYMTAKNNVVMNYKDMNH
TNSYGLIRGLQFASFIFQYYGLVLDLLVLGLTRASEIAGPPQMPNDFLTFRSVEEETRHP
IRLYSRYIDRIHMCFRFTHDEAKELIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMK
HDVNLGRAVFWDIKNRLLRSLTTIEWDNSFLSVYSKDNPNLLFAMCGFEVRILPKCRSLN
EEFTQQDGVWNLQNENTKERTAQAFLRVDEESLGRFENRIRMVLMASGSTTFTKIVNKWN
TSLIGLMTYYREATVHTQELLDLLVKCENKIQTRVKIGLNSKMPSRFPPVVFYTPKELGG
LGMLSMGHVLIPQSDLRYSKQTNVGTTHFRSGMSHEEDQLIPNLYRYIQPWEQEFIDSQR
VWAEYALKRQEANAQNKRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRLRTDWKQ
YQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWE
KASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHG
KIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNS
SCADVLLFAAYKWPVSKPSLLTDTNDVFDSHTTKYWIDVQLRWGDYDSHDIERYARAKFL
DYTTDNMSIYPSPTGVLIALDLAYNLYSAFGNWFTGVKPLLGQAMAKIMKSNPALYVLRE
RIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPING
GIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTR
KGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLK
TISSYTAFSRLVLILRSLHVNHEKTRVILKPDKTVVTQPHHIWPSLNDEQWIKVEVSLKD
LILSDYGKKNNVNVASLTQSEIRDIILGMEISPPSEQRQQIAEIEKQTKEASQLTAVTTK
TTNVHGDEITVTTTSPYGQKMFTSKTDWRVRAISATNLHLRTNHIYVSSDDVKETGFTYV
LPKNVLKKFITISDLRTQVAGFMYGISPPDNPMVKEIRCIVMPPQWGTHQEVNLPHQLPE
HEYLADMEPLGWIHTQPNELPQLPPGDVITHAGIMTDNKAWDAEKAIVITVSFTPGSCSL
TAYKLTPAGYTWGQQNRDNHTHNFSGYSPLFYEKVPMLLSDRFLGFYMVPEHGMWNYNFS
GVKHNPNMKYSLVLANPREFYNEAFRPTHFLSWVSSEDTATAEGGADDGLDADRENLFD
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactgagaccgtgcacatgcacgacgcaccctctgccgccgacaaggcgctg
gaggagaagtcgcgcaagtggcatcagctcaattcaaagcgatatggagagaagaggaaa
ttcgggcacgtcgagccgcagaaggaggacatgccccccgagcacatccgcaagatcatc
aaggatcacggcgacatgtcgagcaagaagttcaggcacgacaagcgcgtgtacctggga
gcgctcaagtacgtgccgcatgcgatcctcaagctgctcgagaacatgccgatgccgtgg
gagcaggtgcgcgacgtgccggtgctctaccacatcacgggcgccatcacgttcgtcaac
cagatcccgctggtcgtcgagcccatctacatcgcgcagtggggttcgatgtggatcatg
atgaggcgcgagaagcgagatcgtcggcatttcaagcgcatgcgattcccgccgttcgac
gacgaggagccgccgctcgactacggcgacaacatcatggacgtcgagccgctcgacccg
atccagatggaattcgaggagatcgaggacgccccagtcaaagattggctgtacgacaac
cggccgctcgccgacaccaagtacatcaacgggccgagctacaagagctggcgtctgccg
ctccccatcatggccaatctctaccgtctcgccagccagctgctcagcgacctcaacgac
aagaactacttctacctcttcgacaccaagtccttcttcacggccaaggcgctcaacatg
gccatccccggcggccccaaattcgagcccatgtaccgcgacatcgacgaggccgacgag
gactggaacgagttcaacgacatcaacaaactcatcatccgccaccagctgcgcacggag
tacaaggtcgcgttcccctacctctacaacaaccgcccgaggagcgtgcacatcaccccc
taccaccacccgctctccgtctacatcaagaccgacgaccccgatctgccggcgttctac
ttcgacccgctcatcaaccccatcgcgtcgtggcgaggcgagaagggccgcggcggcgac
ggcgacgacgacgagttcgacgacgacgaggaggccccgttcgcgctgccggagggcgtc
gagccgctgctcaaggacaccgacctcttcaccgacaacacggccagcggcatcgcgctc
tactgggcgccgcgcccgttcaacctccgctcgggccgcacgaggcgcgcgcaggacgtg
ccgctcgtcaagtcgtggtacatggagcactgcccgcagaaccacccggtcaaggtccgc
gtgagctaccagaagctgctcaagtgctacgtgctcaaccagctcaagcaccggccgccg
aaggcgctcaacaagcgctacctcttccgctcgctggcggcgaccaagttcttccagtcg
acggagctcgattgggtggaggccggtctgcaggtgtgtcggcagggctacaacatgctc
aacctcctcatccaccgcaagaacctcaactacctccacctcgactacaacttcaacctc
aagcccgtcaagacgctcaccaccaaggagcgcaagaagtcgcgtttcggtaacgccttc
catctgtgtcgcgagatcctccggctcacgaagctcgtcgtcgacgccaacgtccacttc
cgcctcggccacgtcgacgccttccagctcgccgacggcctccagtacatcttcgcgcac
gttggccagctcaccggcatgtaccgatacaagtaccgcctcatgcgccagatccgcatg
tgcaaggacctcaagcacctcatctactaccgcttcaacaccggtcccgtcggcaagggt
cccggctgcggcgtctgggcgccggcctggcgcgtgtggctcttcttcctccgcggcgtc
gtgccgctgctcgagcggtggctgggcaacctgctcgccaggcagttcgagggccgccac
tccaagggcatcgccaagaccgtcaccaagcagcgcgtggagagccacttcgatctcgag
ctcagggccgcggtcatgcacgacatcctcgacatgatgcccgagggcatccgggccaac
aagtcgcgcaccatcctccagcacctcagcgaggcgtggcgctgctggaaggccaacatc
ccgtggaaggtgcccggcctgccggcgccgatcgagaacatgatcctgcgctacgtcaag
tccaaggccgactggtggaccaacgtcgcgcactacaaccgcgagcgcatccgccggggc
gccaccgtcgacaagaccgtgtgcaagaagaacctcggtcggctcacgcggctgtggctc
aaggccgagcaggagcggcagcacaactacctcaaggacgggccgtacatcaccgccgag
gaggccgtcgcgatctacaccacgacggtgcactggctcgagagccgcaagttctcgccg
atcccgttcccgccgctcaactacaagcacgacacgaagctgctcatcctgtcgctcgag
cacctcaaggaggcctacagcgtcaagagccggctcaaccagtcgcagcgcgaggagctc
ggcctcgtcgagcaggcctacgacaacccgcacgaggccctgtcgcggatcaagcgccac
ctcctcacgcagcgggccttcaaggagctgggcatcgagttcatggacctctacagctac
ctgatcccggtctacgacatcgagccgctcgagaagatcaccgacgcctacctcgaccag
tacgtgtggtatgaggccgacaagcgtcacctcttccccaactggatcaagcccgccgac
accgagccgccgccgctcctcacctacaagtggtgccagggcatcaacaacctcaccaac
gtgtgggacacgagcgagggcgagtgcgtcgtgctgatggagaccaagctcgagaaggtc
tacgagaagatcgatctcacgctgctcaaccggctcctgcgcctcatcctcgaccacaac
atcgccgactacatgacggccaagaacaacgtggtcatgaactacaaggacatgaaccac
accaactcgtacggcctcatccgcggcctccagttcgcgtcgttcatcttccagtactac
ggcctcgtgctcgacctcctcgtgctcggcctcacccgcgcgtcggagatcgccggcccg
ccgcagatgcccaacgacttcctcaccttccgctccgtcgaggaggagacccgccacccg
atccgcctctactcgcgctacatcgaccggatccacatgtgcttccgcttcacgcacgac
gaggccaaggagctcatccagcgctacctcaccgagcacccggaccccaacaacgagaac
atcgtcggctacaacaacaagaagtgctggccccgcgacgcccgcatgcgcctcatgaag
cacgacgtcaacctcggccgcgccgtcttctgggacatcaagaaccggctcctgcggtcg
ctcaccacgatcgagtgggacaactcgttcctctcggtctacagcaaggacaaccccaac
ctgctgttcgccatgtgcggcttcgaagtccgcatcctgcccaagtgccgctcgctcaac
gaggagttcacccagcaggacggcgtgtggaacctccagaacgagaacaccaaggagcgc
acggcgcaggccttcctgcgcgtcgacgaggagtcgctcggccgcttcgagaaccgcatc
cgcatggtgctcatggcctcgggctccaccaccttcaccaagatcgtcaacaagtggaac
acgtcgctcatcggcctcatgacctactaccgcgaggccaccgtccacacccaggagctg
ctcgacctcctcgtcaagtgcgagaacaagatccagacccgcgtcaagatcggcctcaac
tcgaagatgccctcccgcttcccgcccgtcgtcttctacaccccgaaggagctcggcggc
ctcggcatgctctcaatgggccacgtgctcatcccccagtccgacctccgctactcgaag
cagaccaacgtcggcacgacgcacttccggagcggtatgtcgcacgaggaggaccagctg
attccgaacctctaccgctacatccagccgtgggagcaggagttcatcgactcgcagcgc
gtgtgggccgagtacgcgctcaagcggcaggaggccaacgcgcagaacaagcggctcacg
ctcgaggacctcgaggactcgtgggaccgcggcatcccgcggatcaacacgctcttccag
aaggaccgccacacgctggcctacgacaagggctggcgtctgcgcacggactggaagcag
taccaggtcctcaagcagaacccgttctggtggacccaccagcgccacgacggcaagctg
tggaacctcaacaactaccggacggacatgatccaggcgctgggcggcgtggagggcatc
ctcgagcacacgctgttcaagggcacctacttcccgacgtgggagggtctcttctgggag
aaggcgtcgggcttcgaggagtcgatgaagtacaagaagctcaccaacgcgcagcgctcg
ggtctcaaccagatcccgaaccgtcggttcacgctctggtggtcgccgacgatcaaccgc
gccaacgtctacgtcggcttccaagtgcagctcgacctgacgggcatcttcatgcacggc
aagatccccacgctcaagatctcgctcatccagatcttccgcgcgcatctctggcagaag
gtccacgagagcgtcgtgatggatctgtgccaggtgttcgaccaggagctcgacgcgctc
gagatcgagacggtgcagaaggagacgatccacccgcgcaagtcctacaagatgaactcg
tcgtgcgccgacgtgctcctcttcgccgcgtacaagtggcccgtgtcgaagccctcgctc
ctgaccgacaccaacgacgtcttcgactcgcacacgaccaagtactggatcgacgtccag
ctccgctggggcgactacgactcgcacgacatcgagcgctacgcgcgcgccaagttcctc
gactacacgaccgacaacatgagcatctacccgtcgcccaccggcgtgctcatcgcgctc
gacctggcctacaacctctacagcgccttcggcaactggttcaccggcgtcaagcccctg
ctcggccaggccatggccaagatcatgaagtcgaacccggccctctacgtgctccgcgag
cgcatccgcaagggcctccagctctactcgtccgagcccaccgagccctacctgtcgtcg
cagaactacggcgagctcttctccaaccagatcatctggttcgtcgacgacaccaacgtc
taccgcgtcaccatccacaagacgttcgagggtaacttgacgaccaagcccatcaacggc
ggcatcttcatcttcaacccgcgcaccggccagctcttcctcaagatcatccacacgtcg
gtgtgggccggccagaagcgtctcggccagctggccaagtggaagacggccgaggaggtg
gcggcgctcatccggtcgctgcccgtcgaggagcagcccaagcagatcatcgtcacgcgc
aagggcatgctcgacccgctcgaggtgcacctgctcgacttccccaacatcgtcatcaag
ggctccgagctccagctgcccttccaggcgtgcctcaagatcgagaagttcggcgacctc
atcctcaaggccaccgagccgcagatggtgctcttcaacatctacgacgactggctcaag
acgatctcgtcctacacggccttctcgcgactggtgctcatcctgcgttcgctgcacgtc
aaccacgagaagacgcgcgtcatcctcaagcccgacaagaccgtggtcacgcagccgcac
cacatctggccctcgctcaacgacgagcagtggatcaaggtcgaggtgtcgctcaaggac
ctcatcctctccgactacggcaagaagaacaacgtcaacgtggcctcgctcacgcagtcg
gagatccgcgacatcatcctcggcatggagatctcgccgccgtcggagcagcgccagcag
atcgccgagatcgagaagcagaccaaggaggccagccagctgacggcggtgacgaccaag
accaccaacgtgcacggcgacgagatcaccgtcaccacgacctcgccctacggccagaag
atgttcacctccaagaccgactggcgcgtgcgggccatctcggcgaccaacctccacctc
cgtaccaaccacatctacgtctcgtcggacgacgtcaaggagacgggcttcacctacgtg
ctgcccaagaacgtgctcaagaagttcatcaccatctccgacctccgcacgcaggtggcc
ggcttcatgtacggcatcagcccgccggacaacccgatggtcaaggagatccgctgcatc
gtcatgccgccgcagtggggcacgcaccaggaggtcaacctgccccaccagctccccgag
cacgagtacctcgccgacatggagcccctcggctggatccacacccagcccaacgagctc
ccgcagctcccgcccggcgacgtcatcacccacgccggcatcatgaccgacaacaaggcc
tgggacgccgagaaggccatcgtcatcaccgtctccttcacccccggctcctgctccctc
accgcctacaagctcacccccgccggctacacctggggccagcagaaccgcgacaaccac
acccacaacttctccggctactccccgctcttctacgagaaggtgcccatgctcctctcc
gaccgcttcctcggcttctacatggtccccgagcacggcatgtggaactacaacttctcc
ggcgtcaagcacaaccccaacatgaagtactcgctcgtcctcgccaacccgcgcgagttc
tacaacgaggccttccgccccacccacttcctctcctgggtctcctccgaggacaccgcc
accgccgaaggaggagccgacgacggactcgacgccgaccgcgagaacctcttcgactaa
DBGET
integrated database retrieval system
