Acanthamoeba castellanii: ACA1_061540
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Entry
ACA1_061540 CDS
T02667
Name
(RefSeq) WD domain, G-beta repeat-containing protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
acan
Acanthamoeba castellanii
Pathway
acan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACA1_061540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_061540
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
ACA1_061540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
14918485
NCBI-ProteinID:
XP_004339427
UniProt:
L8GW08
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MQSAAQPSSSSSSATASTSAAPSSSWQERIAGGRITTAPPAFTKDGDFLITCAASVLKVY
SVKTGEVVKTLRHKSRVTGFFFNPANALQLYSAAEEGIIRLWDFEDGVLLKSWKIGGEGK
INQAVLDATQRVVYLSICKVDPNTSQETHLISTFNLNTCTSRVRYTTSKPLAKLYVSPRG
DFFAALQDNCCGFQLFNVNTKDMQSIHHPHKITSFDFHPTEPCVAYGDEAGVIRVNYCLP
RVDPMDSDAKPQVQPNKQTRIDRYDWHTSPISALQFSPDGFYLLSGGQEEVLVLWRLNTS
GRIFIPRLGAAISSVTLNEQGTVYAVCCADNSVRIIDALTRDMVMKIQGISLDIGSMPII
IDPRNDLVVTSFKHGSLQRYDSVRDRHVDEMEIVANPQIDERGHLPFATVKHVAFGPKGS
FMVTTDYRDYTDIDAEIVIKFWLHDGKQYTLNTTAQKAHSAPITGLACHPILPLVASCSR
DGKFKLWEQIERPPPPGSKNKDVTRPVWVCRSVGDFKGLSASGLSFSTDGSLLAVAYKST
ITLWDPMSNTFHRSLTFTNGVAKSIKHLAFIPSSRYLVSATRHQLFVWDLVRCAIVWSYN
VEVHRLAVDMSVNYKANLVFPSPASLVSSFVVTNGQHIFLFNPSSPKPLHVWSAEKRVVR
SLAFVATSSLLPEGRVVYMNDKCELVCLEKKLDKKTENKTDQEKVSLSMSKVKGAKKEVT
EEKLSAFESAFGKLSVAGATTKEGGEDTGVIIAREDTGSLFNPIAPQLSHLFNGPSHLLP
SPAKIYSSFMEGLLKKAHTQVAATADAAAQQPTGAEDNGDSAMQLDAPAEAVDDKKKKEH
AAAANGVDDASTSKNQHKRQTKITEKTFYDSMFKFFSSYAARDEETEMPASLLNELTAPV
RPPKQATQQKQGKGKAKTQSGSGGDKNGKANPQQKKANSGKTEEATPVTTTATPADATPE
AVAATATTPTPTKSPRKKKRASVPAAGGEADAMAVESHTTTGSSGPREEPAQANGTKTTT
PRRRRKSSNGSQQQE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgctgctcagccttcgtcttcatcctcctctgccactgcctccacctccgcc
gctccttcttcttcctggcaggagcgcattgccggtggccgcatcaccactgctccgccc
gccttcaccaaagatggagattttttgatcacctgcgcggcctcggtgctgaaggtgtac
agcgtcaagacgggcgaggtcgtcaagaccctgcgacacaagtcccgggtgaccggcttc
ttcttcaacccggccaacgccctgcagctctactcggcggcagaggagggcatcatccgc
ctgtgggactttgaagacggcgtgctcctcaagagctggaagattggtggtgaggggaag
atcaaccaggctgttctcgacgcgacccagcgcgtggtctacctgagcatctgcaaggtg
gaccccaataccagtcaggagacccatctcatcagcacattcaacttgaacacctgcacg
agccgagtgcgatacaccaccagcaagccccttgccaagctgtacgtcagcccgcggggt
gacttctttgccgccctccaagacaattgttgcggattccagttgttcaacgtgaacacg
aaggacatgcagtccatccaccacccccacaagatcacttcgttcgacttccatccgacc
gagccgtgcgtggcgtacggagatgaggcgggcgtgattcgagtaaactactgcctcccc
cgcgtcgatccgatggacagcgacgccaagccccaggtccagcccaacaagcaaacccgc
atcgacagatacgactggcacacctcccccatctctgcgcttcagttttctcccgacggc
ttctacctgctctccggcggtcaagaggaagtgttggttctctggcgtctgaacaccagc
ggcagaattttcattccccgcctgggtgccgccatctcgtcggtcactctcaacgagcaa
ggaacggtctacgcggtgtgctgcgccgacaacagcgtccgtatcattgacgctttgacg
agggacatggtcatgaagatccagggaatcagcttggatatcggcagcatgcctattatc
atcgacccgcgcaacgacctcgtcgtcacgtcgttcaagcacgggtccctgcagcgctac
gactccgtgcgcgacaggcatgtcgacgaaatggagatcgttgccaacccacagattgat
gagagagggcatctcccgtttgccactgtgaagcatgtggcctttggccccaagggcagc
ttcatggtcacgaccgattaccgtgattacacggacatcgacgccgaaattgtcatcaag
ttttggctgcacgacggaaagcagtacacgctcaacaccacggcgcagaaggcccacagc
gcacctatcacggggctggcttgtcaccccatcctcccgctggtcgcctcgtgctctcgg
gacggcaagttcaagctttgggaacagatcgagaggccacctcctcccggcagcaagaac
aaggacgtgacccgccccgtctgggtgtgccgctcggtgggcgacttcaagggtctgtcg
gcttctggcctctccttctccaccgacggttccctcctcgccgttgcttacaaatcgacg
attaccctttgggacccgatgtcgaacaccttccaccgctcgctcaccttcaccaacgga
gtcgccaaatcgatcaagcatttggccttcattccctcgtctcgttatttggtctccgcc
acccgccaccagctgtttgtgtgggatctggtgcgctgtgctattgtgtggagctacaac
gtggaggtgcacaggctggcggtggatatgtcggtcaactacaaggccaacctggtcttc
ccgtcgcccgcctccctcgtctcgtctttcgtggtcaccaacgggcagcacatcttcctc
ttcaacccgtcgtcgcccaagcccctgcacgtgtggtcggcggagaagcgcgtggtccgg
tcgctcgcctttgtggcgacgtcgagcctcttgcccgagggtcgtgtcgtctacatgaac
gacaagtgcgagctcgtctgcctggagaagaagctggacaagaagaccgaaaacaagaca
gaccaggagaaggtgtcgctgagcatgtcgaaggtgaagggcgccaagaaggaggtcacg
gaggagaagctgtcggcattcgagagcgcgttcggcaagctctcggtcgccggcgccacc
acgaaggagggcggcgaggacacgggcgtcatcatcgcgcgcgaggacaccggctccctc
ttcaaccccatcgcgccgcagctctcccatctcttcaacgggccgtcccatctgttgccc
tcgccggccaagatctactcctcgttcatggagggcctgctcaagaaggcgcacacccag
gtcgccgccaccgccgacgctgctgcccagcagccaaccggcgccgaggataatggcgac
tcggccatgcagctggacgcgccggccgaggccgtcgacgacaagaagaagaaggagcac
gccgccgcggccaacggcgtggacgatgccagcacttcgaagaaccaacacaagaggcag
accaagattacggagaagaccttctacgactcgatgttcaagttcttctcctcctacgct
gctcgcgacgaagaaacggagatgccggcttcgctgctcaacgagctcacggcacccgtg
cggccgccgaagcaggccacgcagcagaagcagggcaagggcaaggccaaaacgcaaagc
ggaagcggcggtgacaagaacggcaaggccaacccgcagcagaagaaggccaatagtggc
aagaccgaggaggcaacgcccgtgacgaccaccgccacgccggcggatgccacgcccgag
gcggtcgcggccactgccaccacgcccactcccacgaagagcccgcgaaagaagaagcgc
gcttcggtgcccgcggcaggaggtgaggcggacgccatggccgtggaaagccacaccacc
accggcagcagcggaccccgagaggagccggcgcaggcgaatggcaccaagaccaccacg
ccacgaaggcgcaggaagagctcgaacggatcgcaacagcaggagtag
DBGET
integrated database retrieval system
