Acanthamoeba castellanii: ACA1_062870
Help
Entry
ACA1_062870 CDS
T02667
Name
(RefSeq) premRNA splicing factor PRP38 family protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_062870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_062870
Spliceosome [BR:
acan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
ACA1_062870
Complex C
U4/U6.U5 tri-SnRNP related factors
ACA1_062870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
14918425
NCBI-ProteinID:
XP_004339546
UniProt:
L8GYB7
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MANRTDPLAKTVHGTNPQFLLEKILRNRIYNNPYWKGDCFGLTAEGLAEKAMELKNFGGT
YGGNRKPTHFMCLVLKMLQIQPEREIVHEFIKNEEHRYVRMLGAFYLRLVGKPQEIYNLL
EPLYVDWRKVRKKVESGGSQITHVDEFIDELLHANYSCDVVLPFLPKRYTLEQQELLPGP
RRSMLEDLEDLSGTEDNGDDDDDADDRRGADQRRSDDRSRSRSTAREKEERQQRGRRDRD
EDEDRRSSPNNGRRDEERSRRRRDDNSRERDEESRDRRRRDDRDRDSRRDSRERDEESRD
RRRRDDDRDRDRDRDNDRDRDRDRRDRDRDRDYRDRDRDRDRRDRDRDRDRDRRSRSRSR
ENRRDRGRDRDQDRDRERRRRRDSRSRSRSRDRDSDDRRDRKRSRSAEVERNRSDKGEDE
TSRDNKKAKHQEDEASTSNVAHGEEEEKNPREEGELAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcggacggaccccctcgcaaagacggtgcatggcaccaatccgcagtttctg
cttgagaagattttgcgtaatcgaatctacaacaatccgtattggaagggcgactgcttc
ggtctcactgccgaggggctcgccgagaaggccatggagctgaagaattttggaggcacg
tatggaggcaatcgcaagccgacgcatttcatgtgcctcgtgctcaagatgctccagatc
cagcccgaacgcgagatcgtgcacgaattcatcaagaacgaggaacaccgctacgtgcgc
atgttgggcgcattctaccttcgtctcgtcgggaagccgcaggagatctacaatctgctc
gagccgctctacgtcgattggaggaaggtcaggaagaaggtcgaatcgggcggcagccag
atcacgcacgtcgatgaattcatcgacgagctcctccacgccaactactcgtgcgacgtc
gtgctgcccttcctgcccaagcgctacacgctcgaacagcaggagctgcttccgggtcct
cgacgcagcatgctcgaggatctcgaggacctctcgggtaccgaagacaatggggacgac
gatgacgacgcagacgaccgtcgcggggccgatcagcgacgcagcgacgaccgcagccgc
agccgcagcacggcaagagagaaggaggagcgacaacagcgaggaaggcgggaccgcgac
gaagacgaggacaggcggtcatcgcccaacaatggaagacgcgacgaggagcgcagccgg
aggaggagggacgacaacagccgtgagcgcgacgaagagagccgagaccggcgacgcagg
gacgaccgagaccgcgacagcagacgtgacagccgtgagcgcgacgaagagagccgagac
cggcgacgcagggatgacgaccgcgaccgcgaccgcgaccgtgacaacgaccgcgaccgc
gacagggaccgcagggaccgcgaccgcgatcgggactacagggacagggacagagatcgc
gaccgcagagacagggaccgggaccgagaccgagaccgacgcagcaggtcgaggagccga
gagaacaggagagaccgcgggcgcgatcgagaccaggaccgggaccgggagagaagaagg
agaagagacagcaggagcaggagcaggtcgagggacagggacagcgacgatcggcgagac
aggaagaggagcaggagtgcggaagtggagaggaacaggagtgataagggagaagacgag
acgagcagggacaacaagaaggcgaagcaccaggaagacgaagcatcgacgtcgaacgtc
gcacatggggaagaagaagagaagaaccccagagaggaaggcgagctggcggcttga
DBGET
integrated database retrieval system