KEGG   Acanthamoeba castellanii: ACA1_062870
Entry
ACA1_062870       CDS       T02667                                 
Name
(RefSeq) premRNA splicing factor PRP38 family protein
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
acan  Acanthamoeba castellanii
Pathway
acan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACA1_062870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acan03041]
    ACA1_062870
Spliceosome [BR:acan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    ACA1_062870
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    ACA1_062870
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 14918425
NCBI-ProteinID: XP_004339546
UniProt: L8GYB7
LinkDB
Position
Unknown
AA seq 458 aa
MANRTDPLAKTVHGTNPQFLLEKILRNRIYNNPYWKGDCFGLTAEGLAEKAMELKNFGGT
YGGNRKPTHFMCLVLKMLQIQPEREIVHEFIKNEEHRYVRMLGAFYLRLVGKPQEIYNLL
EPLYVDWRKVRKKVESGGSQITHVDEFIDELLHANYSCDVVLPFLPKRYTLEQQELLPGP
RRSMLEDLEDLSGTEDNGDDDDDADDRRGADQRRSDDRSRSRSTAREKEERQQRGRRDRD
EDEDRRSSPNNGRRDEERSRRRRDDNSRERDEESRDRRRRDDRDRDSRRDSRERDEESRD
RRRRDDDRDRDRDRDNDRDRDRDRRDRDRDRDYRDRDRDRDRRDRDRDRDRDRRSRSRSR
ENRRDRGRDRDQDRDRERRRRRDSRSRSRSRDRDSDDRRDRKRSRSAEVERNRSDKGEDE
TSRDNKKAKHQEDEASTSNVAHGEEEEKNPREEGELAA
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcgaatcggacggaccccctcgcaaagacggtgcatggcaccaatccgcagtttctg
cttgagaagattttgcgtaatcgaatctacaacaatccgtattggaagggcgactgcttc
ggtctcactgccgaggggctcgccgagaaggccatggagctgaagaattttggaggcacg
tatggaggcaatcgcaagccgacgcatttcatgtgcctcgtgctcaagatgctccagatc
cagcccgaacgcgagatcgtgcacgaattcatcaagaacgaggaacaccgctacgtgcgc
atgttgggcgcattctaccttcgtctcgtcgggaagccgcaggagatctacaatctgctc
gagccgctctacgtcgattggaggaaggtcaggaagaaggtcgaatcgggcggcagccag
atcacgcacgtcgatgaattcatcgacgagctcctccacgccaactactcgtgcgacgtc
gtgctgcccttcctgcccaagcgctacacgctcgaacagcaggagctgcttccgggtcct
cgacgcagcatgctcgaggatctcgaggacctctcgggtaccgaagacaatggggacgac
gatgacgacgcagacgaccgtcgcggggccgatcagcgacgcagcgacgaccgcagccgc
agccgcagcacggcaagagagaaggaggagcgacaacagcgaggaaggcgggaccgcgac
gaagacgaggacaggcggtcatcgcccaacaatggaagacgcgacgaggagcgcagccgg
aggaggagggacgacaacagccgtgagcgcgacgaagagagccgagaccggcgacgcagg
gacgaccgagaccgcgacagcagacgtgacagccgtgagcgcgacgaagagagccgagac
cggcgacgcagggatgacgaccgcgaccgcgaccgcgaccgtgacaacgaccgcgaccgc
gacagggaccgcagggaccgcgaccgcgatcgggactacagggacagggacagagatcgc
gaccgcagagacagggaccgggaccgagaccgagaccgacgcagcaggtcgaggagccga
gagaacaggagagaccgcgggcgcgatcgagaccaggaccgggaccgggagagaagaagg
agaagagacagcaggagcaggagcaggtcgagggacagggacagcgacgatcggcgagac
aggaagaggagcaggagtgcggaagtggagaggaacaggagtgataagggagaagacgag
acgagcagggacaacaagaaggcgaagcaccaggaagacgaagcatcgacgtcgaacgtc
gcacatggggaagaagaagagaagaaccccagagaggaaggcgagctggcggcttga

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