KEGG   Acanthamoeba castellanii: ACA1_063380
Entry
ACA1_063380       CDS       T02667                                 
Name
(RefSeq) splicing factor 3b subunit 1, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
acan  Acanthamoeba castellanii
Pathway
acan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACA1_063380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acan03041]
    ACA1_063380
   03036 Chromosome and associated proteins [BR:acan03036]
    ACA1_063380
Spliceosome [BR:acan03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    ACA1_063380
 Complex B
    ACA1_063380
 Complex C
   U2 SnRNP specific factors
    ACA1_063380
Chromosome and associated proteins [BR:acan03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    ACA1_063380
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG HEAT_EF3_N mTOR_dom Adaptin_N U_exon
Other DBs
NCBI-GeneID: 14918285
NCBI-ProteinID: XP_004339587
UniProt: L8GWI1
LinkDB
Position
Unknown
AA seq 1114 aa
MSDKAAFASAGAFDKDLYSEGKEDYVKELPADESNGDNGNKATEAPKKKRRRWDETPVAA
PVSQWDDDGSATPAAPATGSRWDDATPTATADATPTAKKPRRNRWDETPVAATPGATRGG
WDETPRKGAGEETPRKRSRWDETPANVPMGAATPVGVSFDAMGATPVGNFANIQTPTPGQ
LQFMTPEQMHAMRWERDVDERNKPLTDEELDELMPSEGYKILEPPASYKPIRTPARKIAW
TPTPLTGDGGFMMAEEDLSSHGTVDLEQPVGNLPAIKPEDKPYFEALLQDVNEEELSIEE
QKERKIMKLLLKIKNGTPPMRKQALRQITDKAREFGPGPLFNQILPLLMSPTLEDQERHL
LVKVIDRILYKLDDLVRPFVHNILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIA
TMRPDIDNVDEYVRNTTARAFSVVASALGIPALLPFLRAVCQSKKSWQARHTGIKIVQQI
AILMGCAILPHLKSLVDIIKHGLEDEQQKVRTITALSIAALAEAATPYGIESFDVVLKPL
WYGIRKHRGKGLAAFLKAIGFIIPLMDAEYANYYTKEVMIILIREFSSPDEEMKKIVLKV
VKQCVATEGVTAQYVRDEILPEFFKCFWIRRMALDRRNYRQLVDTTVELANKVGASEIVG
RIVDDLKDESEPYRKMVMETVDKVVQNMGSSDIDSRLEEQLIDGILYAFQEQTSDDSQAI
LNGFGTVVNALNLRCKVYLPQIAGTIKWRLNNKSAKVRQQAADLIARIAPVMKTCGEEKL
MGHLGVVLYEYLGEEYPEVLGSILGGLKAIVNVIGMEKMTPPIKDLLPRLTPILKNRHEK
VQENCIDLVGRIADRGAEYVAAREWMRICFELLDMLKAHKKAIRRATVNTFGYIAKAIGP
QDVLATLLNNLKVQERQNRVCTTVAIAIVAETCQPFTVLPALMNEYRVPELNVQNGVLKA
LSFLFEYIGEMGKDYCYAVTPLLEDALMDRDLVHRQTACTVVKHMALGVQGLSSEDAILH
LLNYVWPNIFETSPHVINAVMEAIEAARVSLGPSPVMQYTFQGLFHPARKVRTVYWKIYN
MLYIGAQDALIPAYPRLEDEPNNTYHRAELDYFL
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgagcgataaggctgcgtttgcatcggctggagccttcgacaaagacctctactcagaa
gggaaagaagactacgtgaaggaattacctgccgatgagagtaatggagataatggaaac
aaagcgacggaagcgcccaagaagaaaaggagaaggtgggacgagacgcccgtagcggcc
cccgtttcgcaatgggacgatgatggatcggccacgcccgcggcaccagcgaccggtagt
cgctgggacgacgccactcccacggccactgccgatgccacccccaccgccaagaagccc
aggcgaaatcgatgggatgagacgccagttgccgcgacgccgggtgccacccgaggcggc
tgggatgagacaccgaggaagggcgcaggagaggagacaccaaggaagaggtcgcgctgg
gatgaaacgcccgccaacgtgcccatgggcgccgcaacgcccgtgggtgtttcgttcgac
gccatgggggccacccccgtcggtaatttcgcgaacatccagacccctacgcccgggcag
cttcaattcatgacccccgagcagatgcacgcgatgcgctgggagcgcgatgtggatgag
aggaacaagcccctcaccgacgaggagctcgatgagctgatgccctcggaggggtacaag
attctcgagccccccgcctcctacaagcccattcgcacacccgcccgcaagatcgcgtgg
acccccaccccgttgacgggcgacggcgggttcatgatggccgaggaggacctctcgtcg
cacgggaccgtcgacctcgagcagcccgtcggcaacctgccggccatcaagcccgaggac
aagccctacttcgaggccctcctgcaggacgtcaacgaggaggagctcagcatcgaggag
cagaaggagcggaagatcatgaagctgctgctcaagatcaagaacggcacgccgcccatg
aggaagcaggccctgcgtcagatcaccgacaaggcgcgcgagttcggcccgggtccgctc
ttcaaccagatcctgcccctcctcatgtcgcccacgctcgaggaccaggagcggcacctg
ctggtcaaggtcatcgaccgcatcctctacaagctcgacgatctcgtccgaccgttcgtg
cacaacatcctggtcgtcatcgagcctctgctcatcgacgaggactactacgcgcgtgtc
gagggccgcgagatcatctccaacctcagcaaggccgccggtctggccaccatgatcgcc
acgatgcgacccgacatcgacaacgtcgacgagtacgtgcgtaacaccaccgcgcgggcc
ttctccgtcgtggcgtcggcgctgggcatccccgcgctcctgcctttcctccgcgccgtg
tgccagagcaagaagtcgtggcaggcgcgtcacacgggcatcaagatcgtgcagcagatc
gccatcctcatgggctgcgccattctgccccacctcaagagcctggtggacatcatcaag
cacggcctcgaggacgagcagcagaaggtgcgcaccatcaccgcgttgtcgatcgccgcg
ctggccgaggccgccacgccctacggtatcgagtcgttcgacgtcgtgctcaagccgctg
tggtacggcatccgcaagcaccgcggcaagggtctcgcggccttcctgaaggccatcggc
ttcatcatcccgctgatggacgccgagtacgccaactactacaccaaggaggtgatgatc
atcctcatccgcgagttctcgtcgcccgacgaggagatgaagaagatcgtgctcaaggtc
gtcaagcagtgcgtggccaccgagggcgtgaccgcgcagtacgtgcgcgacgagatcctg
cccgagttcttcaagtgcttctggatccggcgaatggcgctcgaccgccgcaactaccgg
cagctggtcgacaccaccgtcgagctggccaacaaggtgggtgcctcggagatcgtcggc
cggatcgtggacgacctcaaggacgagtcggagccctaccgaaagatggtgatggagacc
gtcgacaaggtcgtccagaacatgggctcgtcggacatcgactcgcgcctcgaggagcag
ctcatcgacggcatcctctacgccttccaggaacagacctccgacgactcgcaggccatc
ctcaacggcttcggcaccgtcgtcaacgcgctcaacctgcgctgcaaggtctacctgccg
cagatcgccggtacgatcaagtggcgcctcaacaacaagtcggccaaggtgcgccagcag
gcggccgacctcatcgcgcgcatcgcgccggtgatgaagacctgcggcgaggagaagctc
atgggccacctgggcgtcgtgctctacgagtacctgggcgaggagtaccccgaggtgctg
ggctcgatcctcggcggtctcaaggccatcgtcaacgtgatcggcatggagaagatgacg
cccccgatcaaggacctcctgccgcggctcaccccgatcctcaagaaccgacacgagaag
gtgcaggagaactgtatcgacctcgtcggccgtatcgccgacaggggcgccgagtacgtg
gccgcgcgcgagtggatgcgcatctgcttcgagctgctcgacatgctcaaggcccacaag
aaggccatccgccgcgccacggtgaacaccttcggctacatcgccaaggccatcggcccg
caggacgtgctcgccacgctgctcaacaacctcaaggtccaggagcgacagaaccgcgtg
tgcaccaccgtcgccatcgccatcgtcgccgagacgtgccagcccttcaccgtcctcccg
gccctcatgaacgagtaccgcgtgcccgagctcaacgtgcagaacggcgtgctcaaggcc
ctctccttcctcttcgagtacatcggcgagatgggcaaggactactgctacgccgtcact
ccgctcctcgaggacgccctcatggaccgcgacctcgtccaccgacagaccgcctgcacc
gtcgtcaagcacatggcgctcggcgtccagggcctctcctccgaggacgccatcctccac
ctgctcaactacgtgtggcccaacattttcgagacctcgccccacgtcatcaacgccgtc
atggaggccatcgaggccgcccgcgtctcgctcggaccctcgcccgtcatgcagtacacc
ttccagggcctcttccacccggcgcgcaaggtgcggaccgtctactggaagatctacaac
atgctctacatcggcgcccaggacgcgctcatcccggcctacccgcgcctcgaggacgag
cccaacaacacctaccaccgcgccgagctcgactacttcctctaa

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