Acanthamoeba castellanii: ACA1_071980
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Entry
ACA1_071980 CDS
T02667
Name
(RefSeq) CCCHtype Zn finger-containing protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
acan
Acanthamoeba castellanii
Pathway
acan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ACA1_071980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acan03021
]
ACA1_071980
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_071980
Transcription machinery [BR:
acan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ACA1_071980
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ACA1_071980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_4
zf-CCHC_3
zf-CCCH_3
zf-CCCH_9
zf-CCHC_4
zf-CCCH_2
eIF3g
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
14924557
NCBI-ProteinID:
XP_004353104
UniProt:
L8HGM2
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MATMTAPLSTFNQIFDMDNEMVWNDYSFDFEKSFPDLNRPSPSEPCKFYMKGNCVLGQTC
PFRHVYGDKEVCKHWLRGLCKKGESCEYLHEYRLDKMPICYFFSKFGECSNPSGECMFRH
VSPEEKMRECPWYARGFCKHGPRCRHKHVRKPLCEAYMIGFCPDGPLCKLGHPKYELPRL
SGDDPNSQRLRTRTPVVCHKCGVAGHKAANCPDAPRPDMSQPRGPPRPLESVTCFKCGQM
GHYANKCPNKRVNPPPGGYQVPAGGGGRGGGAPHPYSVDYMAME
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgactgcgccccttagcacatttaaccagatttttgatatggacaatgag
atggtgtggaatgactattcattcgacttcgagaaaagcttccccgatctcaacagaccc
tctccaagtgagccatgcaaattctacatgaagggcaattgtgtgctcgggcaaacgtgc
ccctttcggcacgtctatggagacaaagaagtgtgcaagcactggttgcgaggcttgtgc
aagaagggcgagagctgcgagtatctgcacgaataccggctggacaagatgcccatctgt
tacttcttctcgaaatttggcgaatgcagcaatccttcaggcgagtgcatgttccgacac
gtgagccctgaggagaagatgcgagagtgtccctggtacgcgcgcggcttctgcaagcac
ggtccgaggtgtcgacacaagcacgtgaggaagcccttgtgcgaggcctacatgatcgga
ttctgccccgatgggcccctctgcaagctgggccaccccaagtacgaactgcccaggttg
agcggcgacgatcccaacagccagcgattgcgcacgcgcactccggtggtgtgccacaag
tgcggcgtcgccggccacaaggctgccaactgccccgatgccccacgcccggacatgagc
caaccgcgcggtcctccccgtccgctcgaatcggtgacgtgcttcaagtgcggccagatg
ggccactacgccaacaagtgtcccaacaagcgcgtcaatcccccgccaggcgggtaccaa
gtgcccgcgggtggcggcggtcgtggcggcggagcgccccacccctacagcgtcgactac
atggccatggagtga
DBGET
integrated database retrieval system
