Acanthamoeba castellanii: ACA1_074460
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Entry
ACA1_074460 CDS
T02667
Name
(RefSeq) RNA recognition domain containing protein
KO
K13192
RNA-binding protein 26
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acan01009
]
ACA1_074460
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_074460
03041 Spliceosome [BR:
acan03041
]
ACA1_074460
Protein phosphatases and associated proteins [BR:
acan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
ACA1_074460
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
ACA1_074460
Spliceosome [BR:
acan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
ACA1_074460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
RRM_Nup35
RRM_PARP14_3
PWI
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
14924896
NCBI-ProteinID:
XP_004353407
UniProt:
L8HEB3
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MNLSSEQETQLQDYLVEQLEPICAADPKVLSMYILALIKRDDMSTEQVREFCTTELQDFL
KEETKPFIGRLFDMLHEMTSRQSGGGVKKEMDDSRRHKERREDFDNEDAYDQYEDRSSSS
SRRSDDSRKRRSDQGERERERSPAPYDDDSRDRKRRRAGSEEAEERSPSSQRRDRHRRER
DREDTRDVLPSSSSSTSTTSSRRGYDQRGHEAGGRVNIDRPLSSSRGKDEIAGGGRWEGG
REDSRSHPSASSSRYDDGRGSRDYSSRSRTGGRDTRPGGDFGGSRITGRKRGVCYDFEGL
SKLQSDREDTEEAGAYNPEDPFLNKTSPIPVWHGPTSRAAPPVPRGGRGVAGPGLLNPPM
LPLPPMPHPQRLGNQGVLPLPSVPMLPPHQVPYHGGDGLMPTPGSQPYPSRGMRGMRGRG
RGGYHQRPSYEDEGMFRTETESAITDTANFGGNRPPYESHYGDNQGGGRGFNRFKRGRYE
GDYGHRGARPPKPQTDSICVARIPQELNTISQLNAHFQKFGNIVNIQLDPANKQAFVQFT
SNAEALLALRSPEAVMNNRFIQVYLKKDEAQEGGAPAPVVPQPPRPAVRPVPTSTVPQPA
MMSRTPTSLVVQPAAAAQPKNLEELKKKQQELLSKQLEQQKKLLQLLEKMKGTTSKEKDE
VKAQLTALTAKIGEAMKKAREGVAKQTAAPVVGAAPAAATSWKKLSADSEKQRLDRELEL
LAKSKAVIETSTNGASAPPKSTTSEAGASLAESPELSAVGTSSLPAPTKEVDQSRMEALQ
KTLASLQEEAKQLGIPASQIAAQVTGVPSLAGPRGRGVGMRARAAPWWGRGRGRGGRGRG
FASAPRSFKLDNRTTVVCVHDVPQELRDEALLRAHFQAFGEVISLAMQPDSNNFLVQFAQ
RFMAEQAMQKGTALQGHILNMSWHDSTQSAGEAGEQLELAYTEAENQEEVEEYQGGETFV
EEPFAVAEEEIDIDEDKEERSWKRE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcagctcagaacaggagacgcagttgcaggactacctggtggagcagttggaa
ccaatatgtgctgccgatccgaaggtgctgtccatgtacattctggccctcattaagcgc
gatgacatgtcaacggagcaggtcagagagttttgtacgactgagcttcaagattttttg
aaagaggagacgaagcccttcatcgggcgcctttttgatatgctgcacgagatgacctcg
cgccagtccggtggtggtgtgaagaaggaaatggatgactcgcgccggcacaaggagcga
agagaggatttcgacaatgaagacgcgtacgatcagtatgaggatcgcagctcgtcatca
tcgcggcgatcggacgacagcagaaagagacgatcagatcagggcgagcgagagcgggaa
aggagcccagcgccctatgatgacgacagcagagatcgcaagagaaggcgagctggctcg
gaagaggccgaagagcgctcgccctcgtcgcagaggcgcgaccggcacaggcgcgagagg
gaccgtgaggacaccagagatgtgctgccatcatcatcatcctctacttccaccacttcg
tctcggagagggtacgatcagcgcggccatgaggctggtgggcgtgtcaacatcgaccgg
cctctttcttcgagccgaggcaaggacgagattgcaggaggaggtcggtgggagggagga
cgtgaggacagcagatcccaccccagcgcgtccagcagccgctacgatgatggccgaggc
tctcgagactacagctcgcgcagcaggactggcgggcgcgacacaagacccggtggcgat
tttggtggcagccgcattaccggaaggaagcgaggtgtgtgctacgattttgaaggtctg
tccaagctgcagagcgaccgtgaagacactgaggaagccggtgcctacaatccggaggat
ccgttcctcaacaagaccagccccatcccggtgtggcacggtcccacgtcccgagctgcg
cctcccgtgccacgcggtgggcggggcgtcgcgggtcccgggctgctcaacccgcccatg
ctccccctgccacccatgcctcacccgcagaggctcggcaatcagggcgttcttccgctg
ccgtcggtccccatgctgccgcctcatcaggtgccctaccatggcggggacgggctgatg
cccacacccggcagccagccgtacccgtcgcgcggcatgcgtggaatgcgcggccgaggc
cggggcggataccaccagagaccttcctacgaggacgaggggatgttccgcaccgagacg
gagagtgcaatcaccgacacggccaacttcgggggcaaccgacccccttatgagtctcat
tacggcgacaaccaaggaggcggtcgtggcttcaaccggtttaagcgcgggcggtatgag
ggcgactacggccacagaggggccaggccaccgaagcctcagaccgactcgatttgcgtg
gcccgtattccgcaggagctgaacacgatttcgcagctcaacgcacacttccagaagttt
ggcaacatcgtcaacattcagttggatcccgcgaacaaacaggcattcgttcagttcacg
agcaacgccgaggcgctgttggccctgcgctcgcccgaggccgtgatgaacaaccggttc
atccaggtgtacctgaagaaggacgaggcgcaggagggcggcgccccggcccccgtggtc
cctcagccgccccgacccgcggtccgacctgtgcccacgtccactgttccccagccggcg
atgatgtcgcgaacgcccacgtctcttgtggttcagcccgccgccgcggctcagcccaag
aacctggaagagctgaagaagaagcaacaggagcttctcagcaagcaactggagcagcag
aagaaactgcttcaactgctggagaagatgaagggaaccacgtcgaaggagaaagacgag
gtcaaggcgcagctcacggccctcaccgccaagatcggcgaggccatgaagaaggcgcgc
gagggcgtcgccaagcagacggccgctccggttgtcggtgccgcgcctgccgctgccacg
tcgtggaagaagctgagcgccgactccgagaagcagcggttggaccgtgagctcgagttg
ctcgccaagtccaaggccgtcatcgagaccagcaccaacggcgcctcggcgcctccgaag
agcaccaccagcgaagcaggcgcgagcctggccgagtcgcccgagctgagcgccgtcggt
acttcttccctgccggcccctacgaaggaggtcgatcagtcgcgtatggaggccctgcag
aagaccctggccagccttcaggaggaggccaagcagctcggcatccccgcctcccagatt
gccgcccaagttaccggtgtgccctcgctggcgggaccccgaggccgcggagtcgggatg
cgcgcccgagctgctccctggtggggccgcggcagaggcagaggcggtcgaggtcgcggg
tttgcgagtgcgccgcgctcgttcaagctggacaaccgtaccacggtggtctgcgtccac
gacgtgccccaggagctcagggacgaggcgctactgcgcgcccatttccaggcctttggc
gaggtcatctcgctcgccatgcagcccgactccaacaacttcctggtgcagttcgcccaa
cggttcatggccgaacaggctatgcaaaagggcacggcgttgcagggccacattttgaac
atgagctggcacgactccactcaatcggccggcgaggcgggagagcagctcgagctggct
tacacggaggccgagaaccaggaggaggtcgaggagtaccaaggcggcgaaaccttcgtt
gaggagccctttgccgtcgccgaagaagagatcgacatcgacgaggacaaggaagagcgc
tcctggaagagagaataa
DBGET
integrated database retrieval system
