Acanthamoeba castellanii: ACA1_088590
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Entry
ACA1_088590 CDS
T02667
Name
(RefSeq) scavenger mrna decapping enzyme (dcps) protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACA1_088590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_088590
Enzymes [BR:
acan01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
ACA1_088590
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
ACA1_088590
3'-5' decay
Other 3'-5' decay factors
ACA1_088590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
HIT
Motif
Other DBs
NCBI-GeneID:
14917297
NCBI-ProteinID:
XP_004338627
UniProt:
L8GTY2
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MEPDGVLHEMWESLEQVIAAIAGTDEGSATNEQEAMVVGHEGLWLLASSARRRTSYIHPL
QIVEDFRDRWRTRWRHQQYFEVVTYHNGEQYEVKNFRPVKNAFVQQRPGRMEHEISVSDY
KRHCEMAKKIVGYESLNDFKIKNPSVVYRNYFRLRGASDESSPHDGTMELQSGPKRCMLS
CTLCGRNFDYVSRYLVTPQPASSHSSDLRMTSTLERLMGGFHEMQVERVLRESHEYGDLV
VLARLPGAPTAGSSNQNEDEHRAVVVFKSHETLLQLRHVASILRPSTEQRAVRETPEQYA
NIVLPYIRAIPPERNAWIENIFAKTSESDKTFFENEHFVLMNDAKWDGQNVRQLHCLAVV
RRKDLYTMRDLRKEDVPLLRNIIDAGAEAIESTYHLKRDQLKIFVHHLPSFFHLHIHFCS
IYADPRQSQATRAHLVEDIIEALERDTDHFAAKASITYILGENHPLDQLKIFVHHLPSFF
HLHIHFCSIYADPRQSQATRAHLVEDIIEALERDTDHFAAKASITYILGENHPLYKALSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagccagatggagtgcttcacgagatgtgggaatccctggagcaggtcatcgcggca
attgcagggacggatgagggatcggcgacgaatgagcaggaggcgatggtggtagggcac
gagggcctgtggctgctcgcgagtagcgccagacgacgaacgagctacatccatcctctg
cagattgtcgaagactttcgggaccgttggaggacacgctggcgacaccagcagtacttt
gaagtggtcacgtaccacaacggggagcagtacgaggtgaagaacttccgaccggtgaag
aacgctttcgtccagcagcggccggggcgcatggagcacgagatctccgtgtctgactac
aagcgacactgcgagatggccaagaagattgtgggctacgagtcgctcaacgacttcaag
atcaagaacccgtccgtggtctaccgcaactacttcaggctacgcggcgcgagcgacgag
agttcgccacacgacggcacgatggagctgcagagcggccccaagcgatgcatgctgtcg
tgcaccttgtgcggccgcaactttgattatgtctcccgctacctcgtcactccgcaacct
gcctcctcgcacagctctgatctaagaatgacgtccacgttggagcggttgatgggaggg
ttccacgagatgcaagtggagcgggtgctgcgagagagccacgagtacggcgatctcgtt
gtgctggcacggctgccgggtgcgcccaccgccggcagcagcaatcagaatgaagatgaa
cacagggcggtggtggtcttcaaatcccacgagactctcctgcagctgcgacatgtcgcc
tccatcctacggccttcgactgagcagagggcggtgcgagagacgccggagcagtacgcc
aacatcgtcttaccctacatccgcgcaatccctccagagcgcaacgcatggatagagaac
atcttcgccaagacctccgaatcggacaagaccttctttgagaacgaacactttgtgctg
atgaacgacgccaagtgggacggacagaacgtccgccaactccactgcctggcggtggtg
cgacgaaaggacctctacaccatgcgcgacttgcgcaaggaggacgtgccgctcctacgc
aacatcatcgacgctggcgcggaggccatcgaaagcacctaccacctcaagagggaccag
ctaaagatctttgtgcaccacttgccttcgttcttccacctgcacatccacttctgttcg
atctacgccgacccgcgccagagccaggccacgcgagcccacctggtggaggacatcatc
gaggcgctcgagcgcgacacagaccactttgcggccaaggcctccattacctatatctta
ggcgaaaaccatccgctggaccagctaaagatctttgtgcaccacttgccttcgttcttc
cacctgcacatccacttctgttcgatctacgccgacccgcgccagagccaggccacgcga
gcccacctggtggaggacatcatcgaggcgctcgagcgcgacacagaccactttgcggcc
aaggcctccattacctatatcttaggcgaaaaccatccgctgtacaaggcgctctctaaa
tga
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