Acanthamoeba castellanii: ACA1_089000
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Entry
ACA1_089000 CDS
T02667
Name
(RefSeq) MutS domain containing protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
acan
Acanthamoeba castellanii
Pathway
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACA1_089000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_089000
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ACA1_089000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Zn_ribbon_GRF
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-GeneID:
14917436
NCBI-ProteinID:
XP_004338666
UniProt:
L8GVP0
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MTAPFCPGHQQPARYLTVKKNGPNYGTSPSSSQGKESPAKPPSIGSYFTARALFPSHGDS
GLSTTGAQPQASHMQEETEWTDAQYDEPAGEKEAAAPTTSSFFSTPVTPIRLPKRGRDIS
AVVAALSSPKKPSSAPSPSPVATSSSTSSTPSRSTQTSQTFLSTPDAFALSFEDDDIEEP
EDNHSTPPGGMRQEVTANRKSTLSTLTPARPVSAAPRPSQQAQRPVPQQSLSSTPQPVGQ
GQSTVTTGRGEIARGDRHYTTTPTMASPRAAAADNGLKKGTLGRGVQLGARPKPKQLDDD
EASGEEATTGEFGDTWSWLRNELDAERRPRTHPNYDPSTLFIPKSEFARLTPAQQQYWLI
KSKNWDSLVFFRVGKFFELYNKDADLGNKLFDLKLVIKPTRGGSNMRQCGVPVPNLQIWL
AKLVALGHKVVIVDETETSVGAKVRQRQGDGNWKKAVAKSRTDGLVDRQVKQVLTAGTIV
DEGLMNDHRANYILSIKEDIIPDPESRTEEVTYGICFVDCTTSEFNLGQFVDDSERNQLE
TLLLRVKPSEILYEKTLQLIKRSVVCPLMSAREPFLGADATVEYVQQHNVFVGQNDADEH
PAADDLSAWPPVLLEHHEAGASLALSALSGLLVYFHELKLDHLALARKFNHYTPAGSNEL
DHLVLDGKTLTNLEIFENNFDKGVAGTLLNVMDHCVTPFGKRLFKRWIAKPLRRVEDIED
RLNAVEDLNERPELRDALWEQLKSLPDLERAISRIHAGRATTLQFISVLEAFYQIWETWN
NHFKEEVFTQFKSKHLQSIVIIGIPDYSEVLGYFCDAFDWQVAKERKQITPNPGVDLGYD
EVRDNIADLEQQLEEYLDQQRKRFGVSMHYTTSEKKDYLIEVPVGEAEGVDFPKNEFVER
KGTKAVIRLQATRVAGLVPKIEEAKDALDSYLAGVLTQYLATFGQHFAVWSAAVTCVAEL
DCLLSLAKTSAFGGDPMCRPTFVVDVPEGTTPVLEVEELRHPCITPRVADTFIPNDIRIG
GPHAPVVLLTGPNMGGKSTLLRQACISVIMAQMGCYVPASICRLTPVDRIFTRIGANDNI
MAGQSTFMVELQETANILKNATAHSLVIMDELGRGTSTFDGYGIAYGVLDDLSRRLKCRS
LFSTHYHLLTKEFEGNREIALFHMGCLANKETNVARAAGVMESVVRRAEAIATRFEENPS
LDNFALIVGEDEGDENADDEENGPSLAGPLQPEEVAALREVQGTELNFIGFGKLLGLWSD
LAHNQG
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccgttctgcccggggcaccaacaacccgcgcgctacctcaccgtcaagaag
aacggacccaactatggcacgagcccgtcctcctcgcagggcaaggaaagccctgccaaa
ccgcccagcatcgggtcctacttcactgcacgggcgctctttccttcgcacggcgatagc
ggtctcagtaccacgggtgcccagccgcaagcatcgcacatgcaggaggaaacggagtgg
acagacgcgcagtacgacgagccggcgggtgagaaggaggcggctgcgccgacgacgtcg
tccttcttctccactccggtgacgcccattcgtttgcccaagcgtggcagagacattagc
gcagtggtggctgccctgtcgtcgcccaagaagcccagcagcgcaccttcaccgtcgccc
gtcgccacgtcctcttccacgtcatcgacaccatcgcgcagcactcaaacgtctcagacg
ttcctctccacgcccgacgcctttgcgctctcgtttgaggatgacgacattgaagagccc
gaggacaaccacagcacgccgcccggcgggatgcgccaagaggtcaccgcaaaccggaaa
tcgacgctttctactctcacgcccgcaagaccggtcagcgctgcgccccgaccctcgcag
caagctcaacgtcctgtgccgcagcagtccctgtcgtccactccgcagcctgttggccag
ggccagtccacggtcacaacaggacgaggcgaaatcgccaggggagatcggcactacacc
accacgcccaccatggcgtcgccgcgcgcggcagcagcagacaacgggctcaagaagggc
acactcggcagaggggtgcagctcggcgctcgcccaaaacccaagcaactcgacgacgat
gaggccagcggggaagaggcgaccacgggagagttcggggacacgtggtcgtggctcaga
aacgaactcgacgcggagaggcgcccgcgcacccatcccaactacgacccgtccacgctg
ttcatacccaagtcggaattcgctcgtctcacgcccgcccagcagcagtactggctcatc
aagtccaagaactgggactcccttgtcttctttcgcgtgggcaagtttttcgagctctac
aacaaggatgccgacctgggcaacaagctattcgacctcaagctcgtcatcaagcccacc
aggggcggttccaacatgcggcaatgtggcgtccccgtgcccaatcttcaaatctggttg
gccaagctcgtggcgctcgggcacaaggtggtcattgtggacgagaccgagaccagcgtg
ggtgccaaggtgcggcagaggcaaggcgacggcaactggaagaaagccgtagccaagagt
cgaacagacggcctggtggaccgacaagtgaagcaagtgctcaccgccggcaccattgtt
gatgaaggcctgatgaacgaccacagagccaactacattctctccatcaaggaagacatc
attcccgacccggagagccgaaccgaggaggtgacctacggaatctgctttgtggactgc
accactagcgagttcaacctgggccagttcgtggatgacagcgaacgaaaccagctcgag
actcttcttctccgagtcaaaccgtccgagattctctatgaaaagacactgcagctcatc
aagcgcagcgtcgtgtgtccgttgatgtcggcccgcgagccgttcctgggcgccgatgct
acagtggagtacgtgcagcaacacaacgtcttcgtggggcagaacgacgccgacgagcac
ccggcggctgacgacctcagcgcctggcctccggtccttctcgagcaccacgaggccgga
gcctccctggcactatcggcgctcagcggcctgctggtctattttcacgaactcaagttg
gaccacctcgctctggccagaaagtttaaccactacacaccggcgggcagcaacgagctg
gaccatctggtgctcgacggaaagacgctcaccaacctggagatattcgagaacaacttt
gacaagggcgtcgcgggcacgctgctcaatgtgatggaccattgcgttacgccattcggt
aagcgcttgttcaaacggtggatcgcgaagccgctccgccgggtcgaggatatcgaggat
cgcttgaacgctgtggaggatttgaatgaacggccagagctgcgcgacgccctctgggag
cagctcaagtctctgcccgacctcgaacgtgccatttcgcgcatacacgctggcagagcc
accacgctgcagttcatcagtgtgcttgaagcattttatcagatttgggaaacgtggaac
aatcacttcaaggaggaggtgttcacccaattcaagagcaagcacctgcaatctattgta
atcattgggattcccgactactctgaggtcttgggctacttctgcgacgcattcgactgg
caggtggccaaggagagaaagcaaatcactcccaatccgggagtcgatttgggctacgac
gaggtgcgagataacatcgccgatctcgagcaacagctggaggagtacttggaccagcag
aggaagcgctttggagtgtccatgcactacaccacgtcggagaagaaggactacctgatc
gaggtgcccgttggcgaggccgagggggtggatttccccaagaacgagtttgtcgagcgc
aagggcaccaaggcggtgatccgcctgcaggcgacgcgcgtggccggcctggtgccgaag
atcgaggaggccaaggacgcactcgacagctacctggccggtgtgctgacccagtacctg
gccaccttcggccaacactttgcagtgtggtccgccgccgtgacctgcgttgccgagctg
gactgtctgctgtcgttggccaagacctcggccttcggtggagaccccatgtgccggccg
acgttcgtggtcgacgtgcccgaggggaccacgcctgtgctcgaagtcgaagagctgcga
cacccctgcatcaccccgcgcgtggcggacaccttcatccccaacgacatcagaatcgga
ggcccacatgcgccggtcgtgctgttgacgggtcccaacatgggcggcaagtcgacgctc
ctgcgccaggcgtgcataagcgtcatcatggcgcagatgggttgctacgtgcctgcttcg
atttgccgcctcacgcctgtagataggatattcacgcgaatcggcgccaatgataacatc
atggccggacaatccacgttcatggtggaactgcaagagacggccaacatcctaaagaat
gccacggcgcactcgttggtcatcatggacgagctgggccgaggcaccagcaccttcgac
ggatatggcatcgcctacggcgtgctggacgacctttcgcgccggttgaagtgtcgttcg
ctgttttccacccactaccacctcctcacgaaggagttcgagggcaaccgagagatcgcc
ctctttcacatgggctgcctcgccaacaaagaaacgaacgtggctcgagctgcgggtgtc
atggagtcggttgttcggcgagcggaggctatcgccacccgcttcgaggagaatccctcc
cttgacaattttgccctcatcgtgggtgaggatgagggtgacgagaacgccgacgacgag
gagaatggcccttcgctggcgggtccgctccaaccggaagaggtggcagcgctgcgcgag
gtgcaggggaccgaactcaatttcatcggctttggcaagctcctaggcctgtggtccgac
ctggcacacaaccagggatga
DBGET
integrated database retrieval system
